Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03236 and BSU21690

See Amino acid alignment / Visit BSNT_03236 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence dna-align/BSNT_03236___msrA.1.22522.seq
#    -bsequence dna-align/BSU21690___msrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03236___msrA-BSU21690___msrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03236___msrA-BSU21690___msrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03236___msrA
# 2: BSU21690___msrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 534
# Identity:     527/534 (98.7%)
# Similarity:   527/534 (98.7%)
# Gaps:           0/534 ( 0.0%)
# Score: 2607.0
# 
#
#=======================================

BSNT_03236___      1 ATGTCTGAAAAAAAAGAAATCGCCACATTTGCAGGAGGCTGTTTTTGGTG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21690___ms      1 ATGTCTGAAAAAAAAGAAATCGCCACATTTGCAGGAGGCTGTTTTTGGTG     50

BSNT_03236___     51 TATGGTTAAACCTTTTGACGAACAGCCGGGAATTGAAAAAGTGGTGTCCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21690___ms     51 TATGGTTAAACCTTTTGACGAACAGCCGGGAATTGAAAAAGTGGTGTCCG    100

BSNT_03236___    101 GGTATACAGGCGGCCATACTGAAAACCCTACGTATGAAGAGGTGTGCAGT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU21690___ms    101 GGTATACAGGCGGCCATACTGAAAACCCTACGTACGAAGAGGTGTGCAGT    150

BSNT_03236___    151 GAAACGACGGGACATCGTGAAGCCGTTCAAATCACGTTTAATCCTGATGT    200
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU21690___ms    151 GAAACGACGGGACATCGTGAAGCCGTTCAAATCACGTTTCATCCTGATGT    200

BSNT_03236___    201 ATTCCCTTATGAAAAACTGCTTGAATTATTTTGGCAGCAAATCGATCCGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21690___ms    201 ATTCCCTTATGAAAAACTGCTTGAATTATTTTGGCAGCAAATCGATCCGA    250

BSNT_03236___    251 CAGATGCCGGGGGGCAATTTGCTGATCGCGGCAGTTCCTATCGCGCAGCC    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU21690___ms    251 CAGATGCCGGAGGGCAATTTGCTGATCGCGGCAGTTCCTATCGCGCAGCC    300

BSNT_03236___    301 ATTTTTTATCATAATGATAAACAAAAGGAGCTTGCGGAAGCTTCCAAGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21690___ms    301 ATTTTTTATCATAATGATAAACAAAAGGAGCTTGCGGAAGCTTCCAAGCA    350

BSNT_03236___    351 ACGTCTGGCTGAAAGCGGCATCTTTAAAGATCCGATTGTAACGGACATTT    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU21690___ms    351 ACGTCTGGCGGAAAGCGGCATCTTTAAAGATCCGATTGTAACGGACATTT    400

BSNT_03236___    401 TAAAAGCTGAACCTTTCTATGAAGCGGAAGGCTACCATCAGCATTTTTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21690___ms    401 TAAAAGCTGAACCTTTCTATGAAGCGGAAGGCTACCATCAGCATTTTTAT    450

BSNT_03236___    451 AAAAAGAATCCAGCACATTATCAGCGCTACCGGACAGGTTCCGGACGTGC    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU21690___ms    451 AAAAAGAATCCAGCACATTATCAGCGCTACCGGACAGGTTCCGGACGAGC    500

BSNT_03236___    501 GGGGTTTATCAGTGAGCATTGGGGGGCTAAATAA    534
                     |||.||||||||.|||||||||||||||||||||
BSU21690___ms    501 GGGATTTATCAGCGAGCATTGGGGGGCTAAATAA    534


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