Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03229 and BSU19780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_03229___cgeA.1.22522.seq
# -bsequence dna-align/BSU19780___cgeA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03229___cgeA-BSU19780___cgeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03229___cgeA-BSU19780___cgeA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03229___cgeA
# 2: BSU19780___cgeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 295/402 (73.4%)
# Similarity: 295/402 (73.4%)
# Gaps: 90/402 (22.4%)
# Score: 1407.0
#
#
#=======================================
BSNT_03229___ 0 -------------------------------------------------- 0
BSU19780___cg 1 ATGAGCTCTGAAAATGCACAGTTAAAAAAGGATTTAATTAAAGCCGTTTT 50
BSNT_03229___ 1 ----------------------------------------ATGGATAGTA 10
||||||||||
BSU19780___cg 51 AAGCCCTTTATTTCCAACTGCAACAGAAGGAGGAGAAAATATGGATAGTA 100
BSNT_03229___ 11 ACCTTAAAGACTTGCTTGAAGCTGCCATCGATCAAAGAGTAGATGAAAGT 60
|.|||||||.|||||||||.||||||||||||||||.|||||||||||||
BSU19780___cg 101 ATCTTAAAGCCTTGCTTGATGCTGCCATCGATCAAAAAGTAGATGAAAGT 150
BSNT_03229___ 61 GAGATGGTTACGGCAGAATCTCTTTTAGACCCTTCCCTTCCGGCAAGATG 110
||.|.||||||||||||||||.|||||||||||||.||||||||||||||
BSU19780___cg 151 GAAACGGTTACGGCAGAATCTATTTTAGACCCTTCTCTTCCGGCAAGATG 200
BSNT_03229___ 111 GATTTTTGCCAGAGTTACGCCAGGCACGACAATCAGCATTGTAACCGATT 160
|||||||||||||.|||||||||||||.||||||||||||||.||.||||
BSU19780___cg 201 GATTTTTGCCAGAATTACGCCAGGCACTACAATCAGCATTGTGACTGATT 250
BSNT_03229___ 161 CGGGAGACATGATCGGGCCGGTTGTCTTCGTTGCTTTCGATCAGGTTCAC 210
|.||.|||||||||||.||||||||.||||||||||||||||||||||||
BSU19780___cg 251 CAGGTGACATGATCGGACCGGTTGTTTTCGTTGCTTTCGATCAGGTTCAC 300
BSNT_03229___ 211 GGGATCGTATTTGTAACACAGGAAAGCTCCGTCACTCCAGCAGGCCAAGC 260
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19780___cg 301 GGGATCGTATTTGTAACACAGGAAAGCTCCGTCACTCCGGCAGGCCAAGC 350
BSNT_03229___ 261 TACAACATTAATTGATGTAGACAAAGTAGAAAGCGTTACGTTCTTTTCAT 310
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19780___cg 351 TACAACATTAATTGATGTAGACAAAGTAGAAAGCGTTACGTTCTTTTCAT 400
BSNT_03229___ 311 AA 312
||
BSU19780___cg 401 AA 402
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