Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03228 and BSU19770

See Amino acid alignment / Visit BSNT_03228 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_03228___cgeC.1.22522.seq
#    -bsequence dna-align/BSU19770___cgeC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03228___cgeC-BSU19770___cgeC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03228___cgeC-BSU19770___cgeC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03228___cgeC
# 2: BSU19770___cgeC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     303/306 (99.0%)
# Similarity:   303/306 (99.0%)
# Gaps:           0/306 ( 0.0%)
# Score: 1503.0
# 
#
#=======================================

BSNT_03228___      1 TTGGATTTAGAGAAACAAGTGGATCGAGAAGAAAATCAAGATGAACTGCA     50
                     |||||||||||||||||||||||||||||||||||.||||||||.|||||
BSU19770___cg      1 TTGGATTTAGAGAAACAAGTGGATCGAGAAGAAAACCAAGATGATCTGCA     50

BSNT_03228___     51 TTTTATTTTGCTTTTGCTGATTCTGCTGATACGTCAATCGTCTTCTGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19770___cg     51 TTTTATTTTGCTTTTGCTGATTCTGCTGATACGTCAATCGTCTTCTGAAG    100

BSNT_03228___    101 GAAATCCATCTGACCTCAGACGCCAGCTTGTTTTTGCAAAAGAGCTGGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19770___cg    101 GAAATCCATCTGACCTCAGACGCCAGCTTGTTTTTGCAAAAGAGCTGGGC    150

BSNT_03228___    151 GTACCGGTTTCAAAAGTCAATTTGATTAACGGAGATACACTTCAAAATGT    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19770___cg    151 GTACCGGTTTCAAAAGTCAATTTGATCAACGGAGATACACTTCAAAATGT    200

BSNT_03228___    201 CATCGTAAAAGAAGTTCTGACTGATTTGGTTATTTTCCAAAACCCGTTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19770___cg    201 CATCGTAAAAGAAGTTCTGACTGATTTGGTTATTTTCCAAAACCCGTTAA    250

BSNT_03228___    251 ATAACACGAGATCTCATGTTTCACTCTCAAGTGTTGTAAGCTGGGGTGCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19770___cg    251 ATAACACGAGATCTCATGTTTCACTCTCAAGTGTTGTAAGCTGGGGTGCT    300

BSNT_03228___    301 TTTTAA    306
                     ||||||
BSU19770___cg    301 TTTTAA    306


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