Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03217 and BSU19700

See Amino acid alignment / Visit BSNT_03217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:45
# Commandline: needle
#    -asequence dna-align/BSNT_03217___yodP.1.22522.seq
#    -bsequence dna-align/BSU19700___yodP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03217___yodP-BSU19700___yodP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03217___yodP-BSU19700___yodP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03217___yodP
# 2: BSU19700___yodP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     811/828 (97.9%)
# Similarity:   811/828 (97.9%)
# Gaps:           0/828 ( 0.0%)
# Score: 3987.0
# 
#
#=======================================

BSNT_03217___      1 ATGCTCAAGTCAATAAAGAGTAGCGGTGTCACAGCAGTTTTGGACCATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo      1 ATGCTCAAGTCAATAAAGAGTAGCGGTGTCACAGCAGTTTTGGACCATGA     50

BSNT_03217___     51 CGGTTTTAATAAACGAATCAGAGTGGTCCGTTATGACGGAGCCATTGAGA    100
                     |||.|||||||||||||||||||||||.||||||||||||||||||||||
BSU19700___yo     51 CGGCTTTAATAAACGAATCAGAGTGGTTCGTTATGACGGAGCCATTGAGA    100

BSNT_03217___    101 AGGTTCTGCCGGATATCGTGGCAGCGGCAAAAGAAGAGAATGCAGAAAAA    150
                     |||..|||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    101 AGGCCCTGCCGGATATCGTGGCAGCGGCAAAAGAAGAGAATGCAGAAAAA    150

BSNT_03217___    151 ATCATCGTCTATGCGAAGCAGCATGATGAGCCAATGCTTGCCAAACAATT    200
                     |||||.||||||||||||||||||||||||||.||.||||||||||||||
BSU19700___yo    151 ATCATTGTCTATGCGAAGCAGCATGATGAGCCGATCCTTGCCAAACAATT    200

BSNT_03217___    201 ATTTGCGCCGGAGGGCTATCTAAAGGGCTATTATCTCGGCCATTCGGCTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    201 ATTTGCGCCGGAGGGCTATCTAAAGGGCTATTATCTCGGCCATTCGGCTT    250

BSNT_03217___    251 GTGTCATGGTACGTTATCTGTCAGAAAGCCGAAGACAAACAGATTCTTAT    300
                     ||||||||||||||||.||.|||||||||||.||||||||||||||||||
BSU19700___yo    251 GTGTCATGGTACGTTACCTTTCAGAAAGCCGGAGACAAACAGATTCTTAT    300

BSNT_03217___    301 ACAGAGGAACAGGAGATCATCGAAGCCATATATCGCACAGCGCCCCGTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    301 ACAGAGGAACAGGAGATCATCGAAGCCATATATCGCACAGCGCCCCGTCT    350

BSNT_03217___    351 TCGCAACGACAGTAAACCCGTTTTTACGATGAGAAAAGCAGAAACAAACG    400
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU19700___yo    351 TCGCAACGACAGTACACCCGTTTTTACGATGAGAAAAGCAGAAACAAACG    400

BSNT_03217___    401 ACATGTACCAGCTATCGATGCTGTATAAAAAAGTATTTCGCACGTACCCA    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19700___yo    401 ACATGTACCAGCTATCGATGCTGTATAAAAAAGTATTCCGCACGTACCCA    450

BSNT_03217___    451 ACCCCAGTATTTGACCCCGCTTATATTGAAAAGACGATGAATGCAAATAC    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    451 ACCCCGGTATTTGACCCCGCTTATATTGAAAAGACGATGAATGCAAATAC    500

BSNT_03217___    501 GGTGTATTATATCATGTTTGATCATGACCGCCTGATCAGCGCAGCAAGCG    550
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU19700___yo    501 GGTGTATTATATCATGCTTGATCATGACCGCCTGATCAGCGCAGCAAGCG    550

BSNT_03217___    551 CAGAAATCAATCCAGAGCTTGGGCATGCAGAAATAACCGATTGCGCTGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    551 CAGAAATCAATCCAGAGCTTGGGCATGCAGAAATAACCGATTGCGCTGTG    600

BSNT_03217___    601 CTGCCGGAATATCGCGGCCATTCGTTAACAAGCTTTTTAATCGAGGCGTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    601 CTGCCGGAATATCGCGGCCATTCGTTAACAAGCTTTTTAATCGAGGCGTT    650

BSNT_03217___    651 AGAAAAAGAAATGGCTGGAAAGGATATCTTTCATGTGTTTTCTCTCGCCC    700
                     |||||||||||||||||||.||||||||.|||||||||||||||||||||
BSU19700___yo    651 AGAAAAAGAAATGGCTGGAGAGGATATCGTTCATGTGTTTTCTCTCGCCC    700

BSNT_03217___    701 GTGCTTCGTCTTTTGGGATGAATGCTGTGTTGTACCATTCAGGTTATCAA    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU19700___yo    701 GTGCTTCGTCTTTTGGGATGAATGCTGTGTTGTACCATTCAGGTTATCAG    750

BSNT_03217___    751 TATGGCGGAAGGCTGATCAATAATTGCTTTATAGCCGAAGGCCTTGAAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19700___yo    751 TATGGCGGAAGGCTGATCAATAATTGCTTTATAGCCGAAGGCCTTGAAAA    800

BSNT_03217___    801 CATGAATATTTGGTGCAAGCAACTGTAA    828
                     ||||||||||||||||||||||||||||
BSU19700___yo    801 CATGAATATTTGGTGCAAGCAACTGTAA    828


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