Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03209 and BSU19670

See Amino acid alignment / Visit BSNT_03209 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_03209___yodN.1.22522.seq
#    -bsequence dna-align/BSU19670___yodN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03209___yodN-BSU19670___yodN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03209___yodN-BSU19670___yodN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: BSU19670___yodN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     677/681 (99.4%)
# Similarity:   677/681 (99.4%)
# Gaps:           0/681 ( 0.0%)
# Score: 3369.0
# 
#
#=======================================

BSNT_03209___      1 ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo      1 ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCAT     50

BSNT_03209___     51 TATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo     51 TATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAAC    100

BSNT_03209___    101 ACTATCTTTATGAAGTCAATCATAACGAAGTTTTATACTTTGAATCATCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    101 ACTATCTTTATGAAGTCAATCATAACGAAGTTTTATACTTTGAATCATCT    150

BSNT_03209___    151 ATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    151 ATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAGCT    200

BSNT_03209___    201 TGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTAAAAGATT    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU19670___yo    201 TGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTTAAAGATT    250

BSNT_03209___    251 ATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGAGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    251 ATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGAGA    300

BSNT_03209___    301 TATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    301 TATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTTAAA    350

BSNT_03209___    351 GGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    351 GGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCTTA    400

BSNT_03209___    401 GAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    401 GAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATTAT    450

BSNT_03209___    451 GTCGGAGAAACTGGCCATGAGATCGGCGAAGATATCGCATCGTCTGCTCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    451 GTCGGAGAAACTGGCCATGAGATCGGCGAAGATATCGCATCGTCTGCTCT    500

BSNT_03209___    501 TCTTCAGTTTGAAGGCGATGATGAAGATCAAGATACCCTTCACATCCTTG    550
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU19670___yo    501 TCTTCAGTTTGAAGGCGGTGATGAAGATCAAGATACCCTTCACATCCTTG    550

BSNT_03209___    551 CTGTGTCAATTGTTGATGAGCTTCTGGATATTTATAATGACTACAAAATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19670___yo    551 CTGTGTCAATTGTTGATGAGCTTCTGGATATTTATAATGACTACAAAATT    600

BSNT_03209___    601 CTGTACGAAATGTTTCATGATGAAGAATATAAAGACATGATGATGTTTGT    650
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU19670___yo    601 CTGTACGAAATGTTTCAGGATGAAGAATATAAAGACATGATGATGTTTGT    650

BSNT_03209___    651 TTTGGAAAGTTTAAAAGAGCATTTCAGTTAG    681
                     ||||||||||||||||||||||||||||||.
BSU19670___yo    651 TTTGGAAAGTTTAAAAGAGCATTTCAGTTAA    681


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.