Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03204 and BSU19640

See Amino acid alignment / Visit BSNT_03204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_03204___yodL.1.22522.seq
#    -bsequence dna-align/BSU19640___yodL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03204___yodL-BSU19640___yodL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03204___yodL-BSU19640___yodL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03204___yodL
# 2: BSU19640___yodL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     311/315 (98.7%)
# Similarity:   311/315 (98.7%)
# Gaps:           3/315 ( 1.0%)
# Score: 1551.0
# 
#
#=======================================

BSNT_03204___      1 ---ATGTTATCCGTGTTTAAAAAGAAGTCTTGTTCCTATGACGTGACAAT     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo      1 ATGATGTTATCCGTGTTTAAAAAGAAGTCTTGTTCCTATGACGTGACAAT     50

BSNT_03204___     48 ATTTCAGACACCCCGGTTTGGCGAAAAAAAGGGCTACAGAGCCGTCTATC     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo     51 ATTTCAGACACCCCGGTTTGGCGAAAAAAAGGGCTACAGAGCCGTCTATC    100

BSNT_03204___     98 GAACTGAACTGAACGGGAGCGATCATCAAGACGTGCTGAAAAGAGCATTC    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo    101 GAACTGAACTGAACGGGAGCGATCATCAAGACGTGCTGAAAAGAGCATTC    150

BSNT_03204___    148 TCTTTGTTTAATGTATTCGACACTGTTCCGAGTGATTATGATGCAAGATT    197
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo    151 TCTTTGTTTAATGTATTCGACACTGTTCCGAGTGATTATGATGCAAGATT    200

BSNT_03204___    198 TATGGCCACAGGGGACGTGATCCTGATTGATGAAGGCAGAAAAGGGAAAA    247
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo    201 CATGGCCACAGGGGACGTGATCCTGATTGATGAAGGCAGAAAAGGGAAAA    250

BSNT_03204___    248 CATATTATCAACTGCTTCCCGCCGGCTGGAGGAAAATCAATCGTCTGATT    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19640___yo    251 CATATTATCAACTGCTTCCCGCCGGCTGGAGGAAAATCAATCGTCTGATT    300

BSNT_03204___    298 GTACAAACGACATAA    312
                     |||||||||||||||
BSU19640___yo    301 GTACAAACGACATAA    315


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