Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03198 and BSU19620

See Amino acid alignment / Visit BSNT_03198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_03198___yodJ.1.22522.seq
#    -bsequence dna-align/BSU19620___yodJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03198___yodJ-BSU19620___yodJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03198___yodJ-BSU19620___yodJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03198___yodJ
# 2: BSU19620___yodJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     816/822 (99.3%)
# Similarity:   816/822 (99.3%)
# Gaps:           0/822 ( 0.0%)
# Score: 4056.0
# 
#
#=======================================

BSNT_03198___      1 ATGAAAAAGTCCGGTAAATGGTTCTCACTGGCTGCCGCTCTGAGTGTAAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo      1 ATGAAAAAGTCCGGTAAATGGTTCTCACTGGCTGCCGCTCTGAGTGTAAC     50

BSNT_03198___     51 GGCAATAGTCGGAGCCGGCTGCAGCATGTCGAACGGAGATGCTCAAAAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo     51 GGCAATAGTCGGAGCCGGCTGCAGCATGTCGAACGGAGATGCTCAAAAGG    100

BSNT_03198___    101 ATACGAAAACCACAGCAGAAACAAAGCAAACAGAACAAAAAACAGCTGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    101 ATACGAAAACCACAGCAGAAACAAAGCAAACAGAACAAAAAACAGCTGAC    150

BSNT_03198___    151 AGCAAAAAATCAAACACTCAAAACAGTGAGTTTTCATTGGAAAGCCAGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    151 AGCAAAAAATCAAACACTCAAAACAGTGAGTTTTCATTGGAAAGCCAGTA    200

BSNT_03198___    201 TTTCAATGATATTAAAAAAGTCGATGGTCTGGAAACCATTCAAAATCCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    201 TTTCAATGATATTAAAAAAGTCGATGGTCTGGAAACCATTCAAAATCCAG    250

BSNT_03198___    251 AAAATATACTCGCGCTTGTCAATAAACAATATGCACTGCCCGGAAACTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    251 AAAATATACTCGCGCTTGTCAATAAACAATATGCACTGCCCGGAAACTAT    300

BSNT_03198___    301 GAACCTAGCGATCTTGTCATACCTGATGTAGAGTTTTCTTTTGAAGAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    301 GAACCTAGCGATCTTGTCATACCTGATGTAGAGTTTTCTTTTGAAGAAAA    350

BSNT_03198___    351 GATTCAAAAACGTTACATCAGAAAAGAAGCGGCCGACGCATTAAAAACAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    351 GATTCAAAAACGTTACATCAGAAAAGAAGCGGCCGACGCATTAAAAACAA    400

BSNT_03198___    401 TGTTCGATGCTGCCAAAAAGGAAGGCTATGAACTGGCAGCTGTCTCAGGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    401 TGTTCGATGCTGCCAAAAAGGAAGGCTATGAACTGGCAGCTGTCTCAGGG    450

BSNT_03198___    451 TACCGTTCGTATGACAGACAGAAAGTCATTTTTGACAATGAAGTAAGCCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    451 TACCGTTCGTATGACAGACAGAAAGTCATTTTTGACAATGAAGTAAGCCT    500

BSNT_03198___    501 AAAAGGGGAAAAGAAGGCAAAGGAAGCGGTCGCTTACCCCGGGGAAAGCG    550
                     |||||||||||.|||||||||||||||||||||||||||.||.|||||||
BSU19620___yo    501 AAAAGGGGAAAGGAAGGCAAAGGAAGCGGTCGCTTACCCGGGTGAAAGCG    550

BSNT_03198___    551 AGCACCAAACAGGCCTTGCGATGGACATTTCGAGCCGGAGCAATGGCTTT    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    551 AGCATCAAACAGGCCTTGCGATGGACATTTCGAGCCGGAGCAATGGCTTT    600

BSNT_03198___    601 GAGCTAAATGAAGCGTTCGGAAGCACGGCAGACGGGAAATGGGTGCAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    601 GAGCTAAATGAAGCGTTCGGAAGCACGGCAGACGGGAAATGGGTGCAGGA    650

BSNT_03198___    651 CAATGCTTATAAATATGGCTTTATCATTCGCTATCCGAAAAATAAAGAAG    700
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19620___yo    651 CAATGCTTATAAATATGGCTTTATTATTCGCTATCCGAAAAATAAAGAAG    700

BSNT_03198___    701 ATATCACGAAATATGAATATGAGCCATGGCATCTGCGCTATGTAGGCAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19620___yo    701 ATATCACGAAATATGAATATGAGCCATGGCATCTGCGCTATGTAGGCAAA    750

BSNT_03198___    751 AAAGCCGCAAAGGTCATCCAAGATAATGATTTAACGCTAGAAGAGTACTT    800
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19620___yo    751 AAAGCCGCAAAGGTCATCCAAGATAATGATTTAACGCTTGAAGAGTACTT    800

BSNT_03198___    801 TGAAAAAGTGAAGAAAATTTAA    822
                     ||||||||||||||||||||||
BSU19620___yo    801 TGAAAAAGTGAAGAAAATTTAA    822


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