Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03197 and BSU19610

See Amino acid alignment / Visit BSNT_03197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_03197___yodI.1.22522.seq
#    -bsequence dna-align/BSU19610___yodI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03197___yodI-BSU19610___yodI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03197___yodI-BSU19610___yodI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03197___yodI
# 2: BSU19610___yodI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     244/252 (96.8%)
# Similarity:   244/252 (96.8%)
# Gaps:           0/252 ( 0.0%)
# Score: 1188.0
# 
#
#=======================================

BSNT_03197___      1 TTGGAGAGATATTATCATCTTTGCAAAAACCATCAAGGTAAAGTCGTCAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19610___yo      1 TTGGAGAGATATTATCATCTTTGCAAAAACCATCAAGGTAAAGTCGTCAG     50

BSNT_03197___     51 AATTACAGAGAGAGGCGGGAGAGTTCACGTCGGCAGAATTACCCGTGTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19610___yo     51 AATTACAGAGAGAGGCGGGAGAGTTCACGTCGGCAGAATTACCCGTGTAA    100

BSNT_03197___    101 CAAGAGACAGAGTTTTTATAGCTCCGACCGGCGGAGGGCCAAGAGGTTTC    150
                     ||||||||||||||||||||||||||..||||||||||||||||||||||
BSU19610___yo    101 CAAGAGACAGAGTTTTTATAGCTCCGGTCGGCGGAGGGCCAAGAGGTTTC    150

BSNT_03197___    151 GGTTACGGATATTGGGGCGGTTATTGGGGATACGGAGCAGCTTACGGGAT    200
                     ||||||||||||||||||||||||||||||||.|||||.|||||||||||
BSU19610___yo    151 GGTTACGGATATTGGGGCGGTTATTGGGGATATGGAGCGGCTTACGGGAT    200

BSNT_03197___    201 TTCCCTCGGTTTAATTACAGGGGTCGCTCTTGCTGGTTTATTCTTCTGGT    250
                     ||||||||||||||||.||||.||.|||||.|||||||||||||||||||
BSU19610___yo    201 TTCCCTCGGTTTAATTGCAGGAGTGGCTCTGGCTGGTTTATTCTTCTGGT    250

BSNT_03197___    251 AA    252
                     ||
BSU19610___yo    251 AA    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.