Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03196 and BSU19600

See Amino acid alignment / Visit BSNT_03196 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_03196___yodH.1.22522.seq
#    -bsequence dna-align/BSU19600___yodH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03196___yodH-BSU19600___yodH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03196___yodH-BSU19600___yodH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03196___yodH
# 2: BSU19600___yodH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity:     695/702 (99.0%)
# Similarity:   695/702 (99.0%)
# Gaps:           0/702 ( 0.0%)
# Score: 3447.0
# 
#
#=======================================

BSNT_03196___      1 TTGAGCCGATATTTAGAAATGCTGTCCTTATTCGGTGTCGCAGGGGCGCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo      1 TTGAGCCGATATTTAGAAATGCTGTCCTTATTCGGTGTCGCAGGGGCGCA     50

BSNT_03196___     51 CCCAGGCGGACTGGCTTTTTCAAAAGCGGTCTTGCAAAAGGCTGCACCCT    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU19600___yo     51 CCCAGGCGGGCTGGCTTTTTCAAAAGCGGTCTTGCAAAAGGCTGCACCCT    100

BSNT_03196___    101 CTCCGAATCAGCCGATTCTTGATGCCGGATGCGGAACAGGACAAACGGCG    150
                     |||||.||||||||||||||||||||||||||||||||||.|||||||||
BSU19600___yo    101 CTCCGGATCAGCCGATTCTTGATGCCGGATGCGGAACAGGGCAAACGGCG    150

BSNT_03196___    151 GCTTATTTAGGACATTTGCTGTATCCTGTAACAGTCGTTGATAAAGATCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    151 GCTTATTTAGGACATTTGCTGTATCCTGTAACAGTCGTTGATAAAGATCC    200

BSNT_03196___    201 TATTATGCTTGAGAAAGCGAAAAAAAGATTTGCGAATGAAGGGCTTGCCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    201 TATTATGCTTGAGAAAGCGAAAAAAAGATTTGCGAATGAAGGGCTTGCCA    250

BSNT_03196___    251 TCCCTGCATATCAGGCGGAGCTGGAACATCTCCCGTTTTCTTCTGAGTCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    251 TCCCTGCATATCAGGCGGAGCTGGAACATCTCCCGTTTTCTTCTGAGTCC    300

BSNT_03196___    301 TTTTCCTGTGTCCTGTCAGAATCGGTCCTCAGTTTTTCACGCCTGACATC    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    301 TTTTCCTGCGTCCTGTCAGAATCGGTCCTCAGTTTTTCACGCCTGACATC    350

BSNT_03196___    351 CTCTCTTCAAGAAATTTCAAGAGTTTTAAAACCCGGCGGGATGCTGATTG    400
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU19600___yo    351 CTCTCTTCAAGAAATTTCAAGAGTTTTAAAACCCAGCGGGATGCTGATTG    400

BSNT_03196___    401 GTATCGAAGCTGCTTTAAAAAAACCGATGCCCCCTGCAGAAAAGAAGCAA    450
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU19600___yo    401 GTATCGAAGCTGCTTTAAAAAAACCAATGCCCCCTGCAGAAAAGAAGCAA    450

BSNT_03196___    451 ATGATGGATTTTTACGGATTTACTTGCTTACATGAAGAAAGCGAATGGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    451 ATGATGGATTTTTACGGATTTACTTGCTTACATGAAGAAAGCGAATGGCA    500

BSNT_03196___    501 TAAACTCCTAAGATCCTATGGCTTTCAAAAAACAGAAGCGATGACACTTC    550
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU19600___yo    501 TAAACTCCTAAGATCCTATGGCTTTCAAAAAACAGAAGCGATGTCACTTC    550

BSNT_03196___    551 TTCCGGAAGACATGGAATTTGAACCAACCACAGAAATGGATTTATCGCAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    551 TTCCGGAAGACATGGAATTTGAACCAACCACAGAAATGGATTTATCGCAA    600

BSNT_03196___    601 ACGATTGATCCCATCTATTACGATACGCTTCAAACACATTATCAGCTCAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    601 ACGATTGATCCCATCTATTACGATACGCTTCAAACACATTATCAGCTCAT    650

BSNT_03196___    651 GCAGTTATATAGTGAGTACATGGGTCATTGTATTTTTATCGCGTACAAGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19600___yo    651 GCAGTTATATAGTGAGTACATGGGTCATTGTATTTTTATCGCGTACAAGT    700

BSNT_03196___    701 AA    702
                     ||
BSU19600___yo    701 AA    702


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