Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03185 and BSU19560

See Amino acid alignment / Visit BSNT_03185 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_03185___yodD.1.22522.seq
#    -bsequence dna-align/BSU19560___yodD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03185___yodD-BSU19560___yodD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03185___yodD-BSU19560___yodD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: BSU19560___yodD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     594/603 (98.5%)
# Similarity:   594/603 (98.5%)
# Gaps:           0/603 ( 0.0%)
# Score: 2934.0
# 
#
#=======================================

BSNT_03185___      1 ATGAAGCATATTTATGAAAAAGGAACATCTGACAACGTACTTTTGCTGTT     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU19560___yo      1 ATGAAGCATATTTATGAGAAAGGAACATCTGACAACGTACTTTTGCTGTT     50

BSNT_03185___     51 GCATGGCACGGGCGGTAATGAACACGATCTGCTTTCATTGGGGCGGTTTA    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU19560___yo     51 GCATGGCACGGGTGGTAATGAACACGATCTGCTTTCATTGGGGCGGTTTA    100

BSNT_03185___    101 TAGACCCTAATGCCCATTTGCTTGGTGTCAGAGGATCGGTGCTTGAAAAT    150
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    101 TAGACCCTGATGCCCATTTGCTTGGTGTCAGAGGATCGGTGCTTGAAAAT    150

BSNT_03185___    151 GGAATGCCGCGATTTTTCAAACGTCTGAGTGAAGGAGTTTTTGATGAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    151 GGAATGCCGCGATTTTTCAAACGTCTGAGTGAAGGAGTTTTTGATGAAAA    200

BSNT_03185___    201 AGATCTTGTGGTGCGGACAAGAGAATTGAAAGATTTTATCGACGAGGCTG    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    201 GGATCTTGTGGTGCGGACAAGAGAATTGAAAGATTTTATCGACGAGGCTG    250

BSNT_03185___    251 CAGAAACGCATCAGTTTGATCGCGGCAAAGTGATTGCAGTCGGTTATTCA    300
                     |||||||||||||||||.||||||||..||||||||||||||||||||||
BSU19560___yo    251 CAGAAACGCATCAGTTTAATCGCGGCCGAGTGATTGCAGTCGGTTATTCA    300

BSNT_03185___    301 AACGGCGCAAACATTGCGGCAAGCCTGCTTTTTCATTATAAAGATGTGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    301 AACGGCGCAAACATTGCGGCAAGCCTGCTTTTTCATTATAAAGATGTGTT    350

BSNT_03185___    351 AAAAGGGGCTATTCTGCATCATCCAATGGTTCCGATTCGGGGTATCGAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    351 AAAAGGGGCTATTCTGCATCATCCAATGGTTCCGATTCGGGGTATCGAGC    400

BSNT_03185___    401 TGCCTGATATGGCGGGGCTCCCTGTTTTTATCGGTGCCGGGAAATACGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    401 TGCCTGATATGGCGGGGCTCCCTGTTTTTATCGGTGCCGGGAAATACGAT    450

BSNT_03185___    451 CCTCTTTGCACGAAGGAAGAATCAGAAGAGCTTTACCGCTATTTACGTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU19560___yo    451 CCTCTTTGCACGAAGGAAGAATCAGAAGAGCTTTACCGCTATTTGCGTGA    500

BSNT_03185___    501 CAGCGGGGCATCAGCCTCCGTTTTCTGGCAGGACGGGGGCCATCAGCTGA    550
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU19560___yo    501 CAGCGGGGCATCAGCCTCCGTTTACTGGCAGGACGGGGGCCATCAGCTGA    550

BSNT_03185___    551 CTCAGCATGAAGCTGAACAGGCTCGTGAATGGTACAAAGAGGCGATTGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19560___yo    551 CTCAGCATGAAGCTGAACAGGCTCGTGAATGGTACAAAGAGGCGATTGTA    600

BSNT_03185___    601 TAA    603
                     |||
BSU19560___yo    601 TAA    603


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