Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03182 and BSU19550

See Amino acid alignment / Visit BSNT_03182 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_03182___yodC.1.22522.seq
#    -bsequence dna-align/BSU19550___yodC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03182___yodC-BSU19550___yodC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03182___yodC-BSU19550___yodC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03182___yodC
# 2: BSU19550___yodC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 609
# Identity:     604/609 (99.2%)
# Similarity:   604/609 (99.2%)
# Gaps:           0/609 ( 0.0%)
# Score: 3000.0
# 
#
#=======================================

BSNT_03182___      1 ATGACGAATACTCTGGATGTTTTAAAAGCACGTGCATCTGTAAAGGAATA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo      1 ATGACGAATACTCTGGATGTTTTAAAAGCACGTGCATCTGTAAAGGAATA     50

BSNT_03182___     51 TGATACAAATGCCCCGATCTCTAAGGAGGAGCTGACTGAGCTATTAGACT    100
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU19550___yo     51 TGATACAAATGCCCCGATCTCTAAGGAGGAGCTGACTGAGCTATTAGACC    100

BSNT_03182___    101 TTGCCGCTAAAGCGCCTTCTGCTTGGAACCTTCAGCATTGGCATTTTACA    150
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    101 TTGCCACTAAAGCGCCTTCTGCTTGGAACCTTCAGCATTGGCATTTTACA    150

BSNT_03182___    151 GTATTCCACAGCGATGAATCAAAAGCGGAGCTTCTTCCTGTAGCGTATAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    151 GTATTCCACAGCGATGAATCAAAAGCGGAGCTTCTTCCTGTAGCGTATAA    200

BSNT_03182___    201 TCAAAAACAAATCGTTGAGTCTTCTGCTGTTGTTGCCATTTTAGGCGATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    201 TCAAAAACAAATCGTTGAGTCTTCTGCTGTTGTTGCCATTTTAGGCGATT    250

BSNT_03182___    251 TAAAGGCAAATGAAAACGGTGAAGAAGTTTATGCCGAATTAGCAAGCCAA    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU19550___yo    251 TAAAGGCAAATGAAAACGGTGAAGAAGTTTATGCTGAATTAGCAAGCCAA    300

BSNT_03182___    301 GGCTATATTACGGATGAAATCAAACAAACATTGCTCGGCCAAATCAACGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    301 GGCTATATTACGGATGAAATCAAACAAACATTGCTCGGCCAAATCAACGG    350

BSNT_03182___    351 TGCTTACCAAAGCGAGCAATTCGCACGTGATTCCGCTTTCTTAAATGCTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    351 TGCTTACCAAAGCGAGCAATTCGCACGTGATTCCGCTTTCTTAAATGCTT    400

BSNT_03182___    401 CTTTAGCTGCTATGCAGCTTATGATTGCCGCAAAAGCAAAAGGTTATGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    401 CTTTAGCTGCTATGCAGCTTATGATTGCCGCAAAAGCAAAAGGTTATGAC    450

BSNT_03182___    451 ACTTGCGCAATTGGCGGATTTAACAAAGAGCAGTTCCAAAAGCAATTTGA    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU19550___yo    451 ACTTGCGCAATCGGCGGATTTAACAAAGAGCAGTTCCAAAAGCAATTTGA    500

BSNT_03182___    501 TATCAGTGAGCGCTATGTTCCGGTTATGCTAATTTCAATCGGCAAAGCAG    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU19550___yo    501 TATCAGTGAGCGCTATGTTCCGGTTATGCTTATTTCAATCGGCAAAGCAG    550

BSNT_03182___    551 TGAAGCCTGCGCATCAAAGCAACCGTCTGCCGCTTTCAAAAGTATCAACT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19550___yo    551 TGAAGCCTGCGCATCAAAGCAACCGTCTGCCGCTTTCAAAAGTATCAACT    600

BSNT_03182___    601 TGGCTGTAA    609
                     |||||||||
BSU19550___yo    601 TGGCTGTAA    609


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.