Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03181 and BSU19540

See Amino acid alignment / Visit BSNT_03181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_03181___yodB.1.22522.seq
#    -bsequence dna-align/BSU19540___yodB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03181___yodB-BSU19540___yodB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03181___yodB-BSU19540___yodB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03181___yodB
# 2: BSU19540___yodB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     337/339 (99.4%)
# Similarity:   337/339 (99.4%)
# Gaps:           0/339 ( 0.0%)
# Score: 1677.0
# 
#
#=======================================

BSNT_03181___      1 GTGGGAAATACGATGTGCCCTAAAATGGAATCCGCATTCTCATTGCTGGG     50
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19540___yo      1 ATGGGAAATACGATGTGCCCTAAAATGGAATCCGCATTCTCATTGCTGGG     50

BSNT_03181___     51 AAAACGATGGAACGGTCTGATCATCCATGTGCTAATGGATGGGCCGAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19540___yo     51 AAAACGATGGAACGGTCTGATCATCCATGTGCTAATGGATGGGCCGAAAC    100

BSNT_03181___    101 GGTTTAAAGAGATAACGGAAACAATACCGATGATCAGCCAAAAAATGTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19540___yo    101 GGTTTAAAGAGATAACGGAAACAATACCGATGATCAGCCAAAAAATGTTG    150

BSNT_03181___    151 GCAGAGCGCTTGAAGGAGCTTGAACAAAACGAGATTGTCGAACGGCAGGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19540___yo    151 GCAGAGCGCTTGAAGGAGCTTGAACAAAACGAGATTGTCGAACGGCAGGT    200

BSNT_03181___    201 TCTCCCTGAAACGCCGGTCAAAGTCATCTACACGCTGACTGAAAAAGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19540___yo    201 TCTCCCTGAAACGCCGGTCAAAGTCATCTACACGCTGACTGAAAAAGGAA    250

BSNT_03181___    251 CAGCGCTTCAAGCTGTATTTCAAGAGATGCAGGCATGGGCCGATCAATTT    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU19540___yo    251 CAGCGCTTCAAGCTGTATTTCAAGAAATGCAGGCATGGGCCGATCAATTT    300

BSNT_03181___    301 TGCGAGCCTGGTGACACAGTGTGTGAAGAAGAGAAATAA    339
                     |||||||||||||||||||||||||||||||||||||||
BSU19540___yo    301 TGCGAGCCTGGTGACACAGTGTGTGAAGAAGAGAAATAA    339


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