Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03176 and BSU19520

See Amino acid alignment / Visit BSNT_03176 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_03176.1.22522.seq
#    -bsequence dna-align/BSU19520___yojA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03176-BSU19520___yojA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03176-BSU19520___yojA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03176
# 2: BSU19520___yojA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity:     802/1335 (60.1%)
# Similarity:   802/1335 (60.1%)
# Gaps:         519/1335 (38.9%)
# Score: 3954.0
# 
#
#=======================================

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo      1 ATGCCGATTTTAATTGTAGCTGTCGGAGTGCTGATTCTGTTATTTCTCAT     50

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo     51 TATTAAAGTAAAATTAAATACCTTTGTCTCACTGATTGTCGTTTCATTTT    100

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    101 TAGTAGCCATCGGACTTGGAATGGATATCAATAAAATTGTTCTTTCAATT    150

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    151 GAGACTGGAATTGGCGGGCAGCTGGGGCATTTAGCTTTAGTGTTTGGACT    200

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    201 TGGCGCGATGCTTGGGAGGCTTGTCTCAGATGCTGGGGGCGGCTACCGGA    250

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    251 TCGCCATTACGCTGATTGACAAATTCGGGAGGAAACGAATACAGGCGGCG    300

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    301 GTTGTGGTTGCCTCTTTTATCATCGGGATTGCCCTATTTTTTGAAGTCGG    350

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    351 TCTTGTTCTGTTGATACCGATTGTTTACGCGATTGCTAAAGAATTAAAAA    400

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    401 TGCCTTTTCTGTATCTGGGAATCCCGATGGCCGCCGCCTTAAATGTTACT    450

BSNT_03176         0 --------------------------------------------------      0
                                                                       
BSU19520___yo    451 CACGGATTTTTGCCCCCGCATCCTGCTCCAACTGCTATCTCAGTTGCATA    500

BSNT_03176         1 -------------------GTGCTGCTTTTTGGAATCATCATCGCTGTTC     31
                                        |||||||||||||||||||||||||||||||
BSU19520___yo    501 TGGTGCCCATATTGGCCAGGTGCTGCTTTTTGGAATCATCATCGCTGTTC    550

BSNT_03176        32 CGACAACTGTGATTGCCGGGCCTTTATTTAATAAATTTGCGATGAAACGT     81
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU19520___yo    551 CGACAACTGTGATTGCCGGGCCTTTATTTAATAAATTTGCGATGAAACGG    600

BSNT_03176        82 TTTCCTGGTGCGTATCAAAAGCATGGAAACTTATCGGGGTTAGGACCAAG    131
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU19520___yo    601 TTTCCTGGTGCGTATCAAAAGCATGGAAACCTATCGGGGTTAGGACCAAG    650

BSNT_03176       132 GAAAGAATTTCAGCTGGATGAAACACCGGGCTTTGCGATCAGTGCTGTCA    181
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo    651 GAAAGAATTTCAGCTGGATGAAACACCGGGCTTTGCGATCAGTGCTGTCA    700

BSNT_03176       182 CGTCTTTATTCCCGGTTATCTTTATGGCAATGGCAACAGTTTTTTCTTTA    231
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19520___yo    701 CGTCTTTATTCCCGGTTATCTTTATGGCAATGGCAACAATTTTTTCTTTA    750

BSNT_03176       232 TTATTGAATGAACATTCAAAAGGAAAAGACATTATAGAATTTATCGGCAC    281
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo    751 TTATTGAGTGAACATTCAAAAGGAAAAGACATTATAGAATTTATCGGCAC    800

BSNT_03176       282 TCCGGGAACGGCAATGCTCATTTCGCTGTTGCTTGCACTCTATACGATGG    331
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo    801 TCCGGGAACGGCAATGCTCATTTCGCTGTTGCTTGCACTCTATACGATGG    850

BSNT_03176       332 GATATGCCCGTAAAATACCTATGCAGGAAATCAGCAGATCTATTTCAGAA    381
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU19520___yo    851 GATATGCCCGTAAAATATCTATGCAGGAAATCGGCAGATCTATTTCAGAA    900

BSNT_03176       382 TCAATTTCGCAAATTGCGATGATGCTGCTCATCATAGGAGGGGGAGGAGC    431
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo    901 TCAATTTCGCAAATTGCGATGATGCTGCTCATCATAGGAGGGGGAGGAGC    950

BSNT_03176       432 ATTTAAACAGGTGCTGATTGACGGCGGGGTCGGCGATTATGTCGCTGATT    481
                     .||||||||||||||||||||||||||.||||||||||||||||||||||
BSU19520___yo    951 GTTTAAACAGGTGCTGATTGACGGCGGAGTCGGCGATTATGTCGCTGATT   1000

BSNT_03176       482 TTTTCCGTCAAACAAACATGTCGCCGCTATTCGTTGCATGGACCATCGCC    531
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo   1001 TTTTCCGTCAAACAAACATGTCGCCGCTATTCGTTGCATGGACCATCGCC   1050

BSNT_03176       532 GCGGTTCTGCGTCTGTGTCTAGGCTCTGCTCCCGTGGCTGCGCTTACCAC    581
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU19520___yo   1051 GCGGTTCTGCGTCTGTGTCTAGGCTCTGCTACCGTGGCTGCGCTTACCAC   1100

BSNT_03176       582 AGCGGGAATGGTAGCTCCGCTTATGGAGGCTGGCAGTGTAACCCCCGCGT    631
                     |||||||||||.|||||||||||||||||||||||||||||.|||.||||
BSU19520___yo   1101 AGCGGGAATGGCAGCTCCGCTTATGGAGGCTGGCAGTGTAAACCCTGCGT   1150

BSNT_03176       632 TAATGGTGCTTGCAACAGGAGCCGGCAGTGTCATTGCGTGTCATGTAAAT    681
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo   1151 TAATGGTGCTTGCAACAGGAGCCGGCAGTGTCATTGCGTGTCATGTAAAT   1200

BSNT_03176       682 GATGCAGGATTTTGGATGGTAAAGGAATTTTTCGGCTTGAGCATGAAAGA    731
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19520___yo   1201 GATGCAGGATTTTGGATGGTAAAGGAATTTTTCGGCTTGAGCATGAAAGA   1250

BSNT_03176       732 AACATTTCAAACCTGGACGCTGCTTACAACAGTTCTTTCGGTTACAGGAC    781
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19520___yo   1251 AACATTTCAAACCTGGACGCTGCTTACAACAGTTCTTTCGGTTACAGGGC   1300

BSNT_03176       782 TCGGCTGTGTGTTATTGGCAGAGCTTGTGATGTAA    816
                     |||||||||||||||||||||.|||||||||||||
BSU19520___yo   1301 TCGGCTGTGTGTTATTGGCAGGGCTTGTGATGTAA   1335


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