Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03168 and BSU19470

See Amino acid alignment / Visit BSNT_03168 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence dna-align/BSNT_03168___yojF.1.22522.seq
#    -bsequence dna-align/BSU19470___yojF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03168___yojF-BSU19470___yojF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03168___yojF-BSU19470___yojF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03168___yojF
# 2: BSU19470___yojF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     348/351 (99.1%)
# Similarity:   348/351 (99.1%)
# Gaps:           0/351 ( 0.0%)
# Score: 1728.0
# 
#
#=======================================

BSNT_03168___      1 ATGAAAGCGATCATAAAAGAAGATGTGCAAGCATCTTTAGAACGATATGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19470___yo      1 ATGAAAGCGATCATAAAAGAAGATGTGCAAGCATCTTTAGAACGATATGC     50

BSNT_03168___     51 GGACCGCCCTGTATATATCCATTTAGAAACCACCACAGGTTCTTATTCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19470___yo     51 GGACCGCCCTGTATATATCCATTTAGAAACCACCACAGGTTCTTATTCAG    100

BSNT_03168___    101 CGCACTTAAATGAAAAGAACATGACGGTTGTTGCGTATATTCGCAATGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19470___yo    101 CGCACTTAAATGAAAAGAACATGACGGTTGTTGCGTATATTCGCAATGCA    150

BSNT_03168___    151 AAAGTTACTTATCATCAGGCAAAAATCAAAGGCAACGGGCCTTACCGCGT    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU19470___yo    151 AAAGTCACTTATCATCAGGCAAAAATCAAAGGCAACGGGCCTTACCGCGT    200

BSNT_03168___    201 TGGCTTGAAAACAGAAGAAGGCTGGATTTATGCTGAAGGCTTGACTGAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19470___yo    201 TGGCTTGAAAACAGAAGAAGGCTGGATTTATGCTGAAGGCTTGACTGAAT    250

BSNT_03168___    251 ACACGGTAGATGAAGAAAACCGTTTATTAATGGCGGGACATCTGCCGGGC    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU19470___yo    251 ACACGGTAGATGAAGAAAACCGTTTATTAATGGCGGGACACCTGCCGGGC    300

BSNT_03168___    301 GGTAAACTGGCTATTTCTCTGCAAATCAGCGAAAAACCATTCACAGTTTA    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19470___yo    301 GGTAAACTGGCTATTTCTCTGCAAATCAGCGAAAAACCGTTCACAGTTTA    350

BSNT_03168___    351 A    351
                     |
BSU19470___yo    351 A    351


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