Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03157 and BSU19400

See Amino acid alignment / Visit BSNT_03157 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence dna-align/BSNT_03157___yojM.1.22522.seq
#    -bsequence dna-align/BSU19400___sodC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03157___yojM-BSU19400___sodC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03157___yojM-BSU19400___sodC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03157___yojM
# 2: BSU19400___sodC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity:     590/591 (99.8%)
# Similarity:   590/591 (99.8%)
# Gaps:           0/591 ( 0.0%)
# Score: 2946.0
# 
#
#=======================================

BSNT_03157___      1 ATGCACCGTCTCTTGCTGTTGATGATGCTGACGGCACTGGGAGTTGCCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so      1 ATGCACCGTCTCTTGCTGTTGATGATGCTGACGGCACTGGGAGTTGCCGG     50

BSNT_03157___     51 ATGCGGACAAAAAAAACCTCCAGACCCTCCTAACCGGGTGCCGGAAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so     51 ATGCGGACAAAAAAAACCTCCAGACCCTCCTAACCGGGTGCCGGAAAAAA    100

BSNT_03157___    101 AAGTGGTTGAAACGTCAGCGTTTGGTCATCATGTCCAGCTGGTCAATCGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    101 AAGTGGTTGAAACGTCAGCGTTTGGTCATCATGTCCAGCTGGTCAATCGT    150

BSNT_03157___    151 GAAGGGAAAGCAGTCGGTTTTATAGAGATCAAAGAATCAGATGATGAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    151 GAAGGGAAAGCAGTCGGTTTTATAGAGATCAAAGAATCAGATGATGAAGG    200

BSNT_03157___    201 CCTCGATATTCATATTTCCGCAAACAGCCTGCGTCCAGGTGCTTCTCTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    201 CCTCGATATTCATATTTCCGCAAACAGCCTGCGTCCAGGTGCTTCTCTCG    250

BSNT_03157___    251 GTTTTCATATTTATGAGAAAGGTTCTTGTGTCAGGCCGGATTTTGAATCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    251 GTTTTCATATTTATGAGAAAGGTTCTTGTGTCAGGCCGGATTTTGAATCA    300

BSNT_03157___    301 GCGGGCGGTCCCTTTAATCCACTGAACAAAGAACACGGCTTCAATAATCC    350
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU19400___so    301 GCGGGCGGTCCCTTTAATCCACTGAACAAAGAACACGGCTTTAATAATCC    350

BSNT_03157___    351 GATGGGGCATCATGCCGGAGATCTGCCGAACCTTGAAGTCGGTGCTGATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    351 GATGGGGCATCATGCCGGAGATCTGCCGAACCTTGAAGTCGGTGCTGATG    400

BSNT_03157___    401 GAAAGGTAGATGTCATAATGAATGCGCCTGACACTTCACTGAAAAAAGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    401 GAAAGGTAGATGTCATAATGAATGCGCCTGACACTTCACTGAAAAAAGGA    450

BSNT_03157___    451 AGTAAACTAAATATTCTCGACGAGGACGGAAGTGCATTTATTATTCATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    451 AGTAAACTAAATATTCTCGACGAGGACGGAAGTGCATTTATTATTCATGA    500

BSNT_03157___    501 ACAAGCGGACGATTATCTGACAAACCCAAGCGGCAATTCCGGTGCGCGTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19400___so    501 ACAAGCGGACGATTATCTGACAAACCCAAGCGGCAATTCCGGTGCGCGTA    550

BSNT_03157___    551 TTGTCTGCGGAGCCCTTTTGGGAAATAACGAGAAGCAGTAA    591
                     |||||||||||||||||||||||||||||||||||||||||
BSU19400___so    551 TTGTCTGCGGAGCCCTTTTGGGAAATAACGAGAAGCAGTAA    591


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