Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03150 and BSU19340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:38
# Commandline: needle
# -asequence dna-align/BSNT_03150___yocR.1.22522.seq
# -bsequence dna-align/BSU19340___yocR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03150___yocR-BSU19340___yocR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03150___yocR-BSU19340___yocR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03150___yocR
# 2: BSU19340___yocR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1338
# Identity: 1327/1338 (99.2%)
# Similarity: 1327/1338 (99.2%)
# Gaps: 0/1338 ( 0.0%)
# Score: 6591.0
#
#
#=======================================
BSNT_03150___ 1 GTGAAGGAAGCAAATCAATGGTCTTCGAAGCTCGGCTTTATTTTAGCCGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 1 GTGAAGGAAGCAAATCAATGGTCTTCGAAGCTCGGCTTTATTTTAGCCGC 50
BSNT_03150___ 51 GGCAGGATCAGCTATCGGGCTTGGTGCGATATGGAAATTCCCATATGTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 51 GGCAGGATCAGCTATCGGGCTTGGTGCGATATGGAAATTCCCATATGTTG 100
BSNT_03150___ 101 CCGGAACCAGCGGAGGAGGCGCATTTTTACTTATTTTTATTTTATTTACG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 101 CCGGAACCAGCGGAGGAGGCGCATTTTTACTTATTTTTATTTTATTTACG 150
BSNT_03150___ 151 GTTTTAATCGGACTGCCTTTATTGTTAGGTGAATTCATCATAGGCAGAAG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 151 GTTTTAATCGGACTGCCTTTATTGTTAGGTGAATTCATCATAGGCAGAAG 200
BSNT_03150___ 201 AACACAGAAAGATGCCGTTCAGTCCTATAAAACACTTGCTCCAGGAACGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 201 AACACAGAAAGATGCCGTTCAGTCCTATAAAACACTTGCTCCAGGAACGA 250
BSNT_03150___ 251 AGTGGCATTGGATCGGTTATTTAGGCATGGTGACGTGCTTTATTCTTCTA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 251 AGTGGCATTGGATCGGTTATTTAGGCATGGTGACGTGCTTTATTCTTCTA 300
BSNT_03150___ 301 TCTTTCTACAGTGTCGTAGGCGGATGGATTTTAATTTATATTATAAAAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 301 TCTTTCTACAGTGTCGTAGGCGGATGGATTTTAATTTATATTATAAAAGG 350
BSNT_03150___ 351 CTTCACTGGCGGTTTATCGCAAACATCTGGTTTTGATACGATATTTGCAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 351 CTTCACTGGCGGTTTATCGCAAACATCTGGTTTTGATACGATATTTGCAA 400
BSNT_03150___ 401 GTACCATTTCAAATCCTTATTTGGCTGTAGGAGGCCAGCTGCTCTTTATG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 401 GTACCATTTCAAATCCTTATTTGGCTGTAGGAGGCCAGCTGCTCTTTATG 450
BSNT_03150___ 451 GTGGTAACAATTTTAGTTGTTGCAAAAGGGGTAAGCAGCGGAATTGAAAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 451 GTGGTAACAATTTTAGTTGTTGCAAAAGGGGTAAGCAGCGGAATTGAAAA 500
BSNT_03150___ 501 AGCAAGCCAAGTATTAATGCCGGCGCTTTTTCTATTATTCATCATTTTAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 501 AGCAAGCCAAGTATTAATGCCGGCGCTTTTTCTATTATTCATCATTTTAA 550
BSNT_03150___ 551 TGGTGCGTTCGGTTACACTTGATGGCGCGATGGAAGGAATCAAATTTTTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 551 TGGTGCGTTCGGTTACACTTGATGGCGCGATGGAAGGAATCAAATTTTTC 600
BSNT_03150___ 601 CTCATGCCTGATTTAACTGCAATTGATGCCAATACCATTTTATATGCAAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 601 CTCATGCCTGATTTAACTGCAATTGATGCCAATACCATTTTATATGCAAT 650
BSNT_03150___ 651 GGGACAATCCTTTTTCTTATTAAGTGTCGGTGTATCTGTCATGGTAACGT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 651 GGGACAATCCTTTTTCTTATTAAGTGTCGGTGTATCTGTCATGGTAACGT 700
BSNT_03150___ 701 ATAGCGCTTATTTAGAGAAACAGGAAAATCTGGTACAGTCCGCTGTATCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 701 ATAGCGCTTATTTAGAGAAACAGGAAAATCTGGTACAGTCCGCTGTATCT 750
BSNT_03150___ 751 GTAACTGTTATGAACATGCTTGTTGCTGTAATGGCCGGAATTGCGATTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 751 GTAACTGTTATGAACATGCTTGTTGCTGTAATGGCCGGAATTGCGATTTT 800
BSNT_03150___ 801 TCCAGCTGTATTTTCATTCGGCCTCAAGCCAGACCAAGGCCCGGTTCTGT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 801 TCCAGCTGTATTTTCATTCGGCCTCAAGCCAGACCAAGGCCCGGTTCTGT 850
BSNT_03150___ 851 TATTTAACGTTCTGCCGACTGTGTTTAATCAAATGCCGTTCGGAATTATC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 851 TATTTAACGTTCTGCCGACTGTGTTTAATCAAATGCCGTTCGGAATTATC 900
BSNT_03150___ 901 TTTTTATTAGCATTTTTACTTCTATTTTTATTTGCTGCATTGACATCTGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 901 TTTTTATTAGCATTTTTACTTCTATTTTTATTTGCTGCATTGACATCTGC 950
BSNT_03150___ 951 TTTTTCAATGCTGGAAATTTTGGTCGCAGTACTGTCGAAAGGCGATGTCA 1000
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU19340___yo 951 TTTTTCAATGCTGGAAATTTTGGTCGCAGTACTGTCGAAAGGCGATATCA 1000
BSNT_03150___ 1001 ATAAGAGAAAACGATTCGCTTGGTTAGGCGGAATTGCTATTTTTATTGTC 1050
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU19340___yo 1001 ATAAGAGAAAACGATTCGCTTGGTTAGGCGGTATTGCTATTTTTATTGTC 1050
BSNT_03150___ 1051 GGTGTGCCGTCTGCATTGTCATACGGTGTCTTAAGTGACGTCTCTATATT 1100
|||||||||||||||||.||||||||||||||||||||||||.|||||||
BSU19340___yo 1051 GGTGTGCCGTCTGCATTATCATACGGTGTCTTAAGTGACGTCACTATATT 1100
BSNT_03150___ 1101 TCATCTGTCTATTTTTGATGCGGCCGACTATCTTGTGAGCAATATTTTAA 1150
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19340___yo 1101 TCATCTGTCTATTTTTGATGCGGCTGACTATCTTGTGAGCAATATTTTAA 1150
BSNT_03150___ 1151 TGCCGTTAGGTGCGTTACTGATTTCGATTTTTGTCCCGCTAAAAATACCG 1200
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU19340___yo 1151 TGCCGTTAGGTGCGTTACTGATTTCGATTTTTGTTCCGCTAAAAATACCG 1200
BSNT_03150___ 1201 AAACAGGATTTGTTTGACGAGCTGAAAAGCGGTTCCAATCTCAAACGAAA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19340___yo 1201 AAACAGGATTTGTTTGACGAGCTGAAAAGCGGTTCCAATCTCAAACGAAA 1250
BSNT_03150___ 1251 GTGGTTTGCGGTTTGGCTGCTGCTTATTCGATATTTATCTCCTGTTGCCA 1300
||||||||||||||||||||||||.|||||||||.|||||||||||||||
BSU19340___yo 1251 GTGGTTTGCGGTTTGGCTGCTGCTCATTCGATATCTATCTCCTGTTGCCA 1300
BSNT_03150___ 1301 TTATCATCGTGTTTTTGCATGTGGTAGGGATTTTTTAA 1338
|.|||||||||||||||||||||.||||.|||||||||
BSU19340___yo 1301 TCATCATCGTGTTTTTGCATGTGATAGGTATTTTTTAA 1338
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