Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03149 and BSU19330

See Amino acid alignment / Visit BSNT_03149 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:38
# Commandline: needle
#    -asequence dna-align/BSNT_03149___sodF.1.22522.seq
#    -bsequence dna-align/BSU19330___sodF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03149___sodF-BSU19330___sodF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03149___sodF-BSU19330___sodF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03149___sodF
# 2: BSU19330___sodF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     828/846 (97.9%)
# Similarity:   828/846 (97.9%)
# Gaps:           9/846 ( 1.1%)
# Score: 4090.0
# 
#
#=======================================

BSNT_03149___      1 ATGAAACGTGAATCTTATCAAACGGAGATGTTCAATTGGTGTGAAGCCCT     50
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU19330___so      1 ATGAAACGTGAATCTTATCAAGCGGAGATGTTCAATTGGTGTGAAGCCCT     50

BSNT_03149___     51 GAAAGATCAGATTCAAAAGCGAGGACAGCTTGACCAGTTTGAAGATCAAA    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19330___so     51 GAAAGATCAGATTCAAAAGCGAGGTCAGCTTGACCAGTTTGAAGATCAAA    100

BSNT_03149___    101 TCGACAAGATGATTGAGGCTCTGGAAGATGACCAAACAACAGAAGAAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    101 TCGACAAGATGATTGAGGCTCTGGAAGATGACCAAACAACAGAAGAAGAT    150

BSNT_03149___    151 TGGTATAAACAGGCCGCTGCCCTTTACCGGGATATTACAGAATCAGATGA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19330___so    151 TGGTATAAACAGGCCGCTGCCCTTTATCGGGATATTACAGAATCAGATGA    200

BSNT_03149___    201 TACAAGTGAAAGACGCGCATATGTCCCTATAGGGAAACACGTGCTGCCAA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU19330___so    201 TACAAGTGAAAGACGCGCTTATGTCCCTATAGGGAAACACGTGCTGCCAA    250

BSNT_03149___    251 AGCTTCCTTACAAATACTCCGCCTTAGAACCTTATATTTCACGCGATATT    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19330___so    251 AGCTTCCTTACAAATACTCCGCCTTAGAACCTTATATATCACGCGATATT    300

BSNT_03149___    301 ATGGTCCTTCATCATACAAAACATCATCAAAGCTATGTCGATGGCCTGAA    350
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    301 ATGATCCTTCATCATACAAAACATCATCAAAGCTATGTCGATGGCCTGAA    350

BSNT_03149___    351 CAAAGCAGAATCAGAGCTTAAAAAAGCGAGAGCAACAAAGAATTATGACT    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU19330___so    351 CAAAGCAGAATCAGAGCTTAAAAAAGCGAGAGCGACAAAGAATTATGACT    400

BSNT_03149___    401 TAATCACTCATTGGGAAAGAGAGCTTGCGTTCCATGGAGCAGGCCATTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    401 TAATCACTCATTGGGAAAGAGAGCTTGCGTTCCATGGAGCAGGCCATTAT    450

BSNT_03149___    451 TTGCACAGTATTTTTTGGTTTTCTATGCATCCAAACGGAAAACGGCGTCC    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    451 TTGCATAGTATTTTTTGGTTTTCTATGCATCCAAACGGAAAACGGCGTCC    500

BSNT_03149___    501 TACAGGGGCATTGTTCCAAATGATAGACCTTTCATTTGGAAGCTATTCCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    501 TACAGGGGCATTGTTCCAAATGATAGACCTTTCATTTGGAAGCTATTCCG    550

BSNT_03149___    551 CTTTTAAAGAACATTTTACCCAGGCCGCTAAAAAAGTGGAAGGCGTCGGC    600
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19330___so    551 CTTTTAAAGAACATTTTACCCAGGCCTCTAAAAAAGTGGAAGGCGTCGGC    600

BSNT_03149___    601 TGGGCCATTCTGGTCTGGGCACCTCGATCAGGACGGCTGGAGATTTTAAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    601 TGGGCCATTCTGGTCTGGGCACCTCGATCAGGACGGCTGGAGATTTTAAC    650

BSNT_03149___    651 GGCAGAAAAACACCAG---------CAATGGGATGTGATCCCCCTTTTAC    691
                     ||||||||||||||||         |||||||||||||||||||||||||
BSU19330___so    651 GGCAGAAAAACACCAGCTCTTTAGCCAATGGGATGTGATCCCCCTTTTAC    700

BSNT_03149___    692 CGCTTGACGTATGGGAGCATGCCTACTATTTGCAATACAAAAATGACCGG    741
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    701 CGCTTGACGTATGGGAGCATGCCTACTATTTGCAATACAAAAATGACCGG    750

BSNT_03149___    742 GCCAGCTATGTCGATCACTGGTGGAATGTCGTGGATTGGCGCGAGGCTGA    791
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    751 GCCAGCTATGTCGATCACTGGTGGAATGTCGTGGATTGGCGCGAGGCTGA    800

BSNT_03149___    792 AAAACGTTTTGAGCAGGCAAAAGAAGTCGTTTGGAAGCTCTATTAA    837
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU19330___so    801 AAAACGTTTTGAGCAGGCAAAAGAAGTCGTTTGGAAGCTCTATTAA    846


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03149 and BSU19330

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
