Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03148 and BSU19320

See Amino acid alignment / Visit BSNT_03148 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:37
# Commandline: needle
#    -asequence dna-align/BSNT_03148___sqhC.1.22522.seq
#    -bsequence dna-align/BSU19320___sqhC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03148___sqhC-BSU19320___sqhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03148___sqhC-BSU19320___sqhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03148___sqhC
# 2: BSU19320___sqhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1899
# Identity:    1880/1899 (99.0%)
# Similarity:  1880/1899 (99.0%)
# Gaps:           0/1899 ( 0.0%)
# Score: 9324.0
# 
#
#=======================================

BSNT_03148___      1 ATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq      1 ATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAC     50

BSNT_03148___     51 CGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATTTTGCTTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq     51 CGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATTTTGCTTTG    100

BSNT_03148___    101 AAGGACCAATCATGACAAATTCCTTTTTTATTTTGCTCCTTACCTCACTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    101 AAGGACCAATCATGACAAATTCCTTTTTTATTTTGCTCCTTACCTCACTA    150

BSNT_03148___    151 GATGAAGGCGAAAATGAAAAAGAACTGATATCATCCCTTGCAGCCGGCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    151 GATGAAGGCGAAAATGAAAAAGAACTGATATCATCCCTTGCAGCCGGCAT    200

BSNT_03148___    201 TCATGCAAAACAGCAGCCAGACGGCACATTTATCAACTATCCCGACGAAA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU19320___sq    201 TCATGCAAAACAGCAGCCAGACGGCACATTTATCAACTATCCCGATGAAA    250

BSNT_03148___    251 CGTGCGGAAATCTAACGGCTACCGTCCAAGGATATGTCGGGATGCTGGCT    300
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    251 CGCGCGGAAATCTAACGGCTACCGTCCAAGGATATGTCGGGATGCTGGCT    300

BSNT_03148___    301 TCAGGATGTTTTCACAGATCTGAGCCGCACATGAAGAAAGCTGAACAATT    350
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU19320___sq    301 TCAGGATGTTTTCACAGAACTGAGCCGCACATGAAGAAAGCTGAACAATT    350

BSNT_03148___    351 TATCATCTCATATGGCGGTTTGAGACATGTTCATTTTATGACAAAATGGA    400
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU19320___sq    351 TATCATCTCACATGGCGGTTTGAGACATGTTCATTTTATGACAAAATGGA    400

BSNT_03148___    401 TGCTTGCCGCGAACGGGCTTTACCCTTGGCCTGCTTTGTATTTACCATTA    450
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU19320___sq    401 TGCTTGCCGCGAACGGGCTTTATCCTTGGCCTGCTTTGTATTTACCATTA    450

BSNT_03148___    451 TCACTCATGGCGCTCCCCCCAACATTGCCGATTCATTTCTATCAGTTCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    451 TCACTCATGGCGCTCCCCCCAACATTGCCGATTCATTTCTATCAGTTCAG    500

BSNT_03148___    501 CTCATATGCCCGTATTCATTTTGCTCCTATGGCTGTAACACTCAATCAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    501 CTCATATGCCCGTATTCATTTTGCTCCTATGGCTGTAACACTCAATCAGC    550

BSNT_03148___    551 GATTTGTCCTTATTAACCGCAATATTTCATCTCTTCGCCATCTCGATCCG    600
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU19320___sq    551 GATTTGTCCTTATTAACCGCAATATTTCATCTCTTCACCATCTCGATCCG    600

BSNT_03148___    601 CACATGACAAAAAATCCTTTCACTTGGCTTCGGTCTGATGCTTTCGATGA    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU19320___sq    601 CACATGACAAAAAATCCTTTCACTTGGCTTCGGTCTGATGCTTTCGAAGA    650

BSNT_03148___    651 AAGAGATCTCACGTCTATTTTGTCACATTGGAAACGCGTTTTTCATGCAC    700
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU19320___sq    651 AAGAGATCTCACGTCTATTTTGTTACATTGGAAACGCGTTTTTCATGCAC    700

BSNT_03148___    701 CATTTGCTTTTCAGCAGCTGGGCCTACAGACAGCTAAAACGTATATGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    701 CATTTGCTTTTCAGCAGCTGGGCCTACAGACAGCTAAAACGTATATGCTG    750

BSNT_03148___    751 GACCGGATTGAAAAAGATGGAACATTATACAGCTATGCGAGCGCAACCAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    751 GACCGGATTGAAAAAGATGGAACATTATACAGCTATGCGAGCGCAACCAT    800

BSNT_03148___    801 ATATATGGTTTACAGCCTTCTGTCACTTGGTGTGTCACGCTATTCTCCTA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    801 ATATATGGTTTACAGCCTTCTGTCACTTGGTGTGTCACGCTATTCTCCTA    850

BSNT_03148___    851 TTATCAGGAGAGCGATTACCGGCATTAAATCACTGGTGACTAAATGCAAC    900
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU19320___sq    851 TTATCAGGAGGGCGATTACCGGCATTAAATCACTGGTGACTAAATGCAAC    900

BSNT_03148___    901 GGGATTCCTTATCTGGAAAACTCTACTTCAACTGTTTGGGATACAGCTCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19320___sq    901 GGGATTCCTTATCTGGAAAACTCTACTTCAACTGTTTGGGATACAGCTTT    950

BSNT_03148___    951 AATCAGCTATGCCCTTCAAAAAAATGGTGTGACCGAAACGGATGGCTCTG   1000
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq    951 AATAAGCTATGCCCTTCAAAAAAATGGTGTGACCGAAACGGATGGCTCTG   1000

BSNT_03148___   1001 TTACAAAAGCAGCCGACTTTTTGCTAGAACGCCAGCATACCAAAACAGCA   1050
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU19320___sq   1001 TTACAAAAGCAGCCGACTTTTTGCTAGAACGCCAGCATACCAAAATAGCA   1050

BSNT_03148___   1051 GATTGGTCTGTCAAAAATCCAAATTCAGTTCCTGGCGGCTGGGGGTTTTC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1051 GATTGGTCTGTCAAAAATCCAAATTCAGTTCCTGGCGGCTGGGGGTTTTC   1100

BSNT_03148___   1101 AAACATTAATACAAATAACCCTGACTGTGACGACACTGCAGCCGTTTTAA   1150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19320___sq   1101 AAACATTAATACAAATAACCCTGACTGTGACGACACTACAGCCGTTTTAA   1150

BSNT_03148___   1151 AGGCGATTCCCCGCAATCATTCTCCTGCAGCATGGGAGCGGGGGGTATCT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1151 AGGCGATTCCCCGCAATCATTCTCCTGCAGCATGGGAGCGGGGGGTATCT   1200

BSNT_03148___   1201 TGGCTTTTATCGATGCAAAACAATGACGGCGGATTTTCTGCTTTTGAAAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU19320___sq   1201 TGGCTTTTATCGATGCAAAACAATGACGGCGGATTTTCTGCTTTCGAAAA   1250

BSNT_03148___   1251 AAACGTGAACCATCCACTGATCCGCCTTCTGCCGCTTGAATCCGCCGAGG   1300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1251 AAATGTGAACCATCCACTGATCCGCCTTCTGCCGCTTGAATCCGCCGAGG   1300

BSNT_03148___   1301 ACGCTGCAGTTGACCCTTCAACCGCCGACCTCACCGGACGAGTACTGCAC   1350
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU19320___sq   1301 ACGCTGCAGTTGACCCTTCAACCGCCGACCTCACCGGACGTGTACTGCAC   1350

BSNT_03148___   1351 TTTTTAGGCGAGAAAGTTGGCTTCACAGAAAAACAACAACATATTCAACG   1400
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU19320___sq   1351 TTTTTAGGCGAGAAAGTTGGCTTCACAGAAAAACATCAACATATTCAACG   1400

BSNT_03148___   1401 CGCAGTGAAGTGGCTATTCGAACATCAGGAACAAAATGGGTCTTGGTACG   1450
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU19320___sq   1401 CGCAGTGAAGTGGCTTTTCGAACATCAGGAACAAAATGGGTCTTGGTACG   1450

BSNT_03148___   1451 GCAGATGGGGTGTTTGCTACATTTACGGCACTTGGGCTGCTCTTACTGGT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1451 GCAGATGGGGTGTTTGCTACATTTACGGCACTTGGGCTGCTCTTACTGGT   1500

BSNT_03148___   1501 ATGCATGCATGCGGGGTTGACCGAAAGCATCCCGGTATACAAAAGGCTCT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1501 ATGCATGCATGCGGGGTTGACCGAAAGCATCCCGGTATACAAAAGGCTCT   1550

BSNT_03148___   1551 GCGTTGGCTCAAATCCATACAAAATGATGACGGAAGCTGGGGAGAATCCT   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1551 GCGTTGGCTCAAATCCATACAAAATGATGACGGAAGCTGGGGAGAATCCT   1600

BSNT_03148___   1601 GCAAAAGCGCCGAAATCAAAACATATGTACCGCTTCATAGAGGAACCATT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1601 GCAAAAGCGCCGAAATCAAAACATATGTACCGCTTCATAGAGGAACCATT   1650

BSNT_03148___   1651 GTACAAACGGCCTGGGCTTTAGACGCTTTGCTCACATATGAAAATTCCGA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1651 GTACAAACGGCCTGGGCTTTAGACGCTTTGCTCACATATGAAAATTCCGA   1700

BSNT_03148___   1701 ACATCCGTCTGTTGTGAAAGGCATGCAATACCTTACCGACAGCAGTTCGC   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1701 ACATCCGTCTGTTGTGAAAGGCATGCAATACCTTACCGACAGCAGTTCGC   1750

BSNT_03148___   1751 ATAGCGCCGATAGCCTCGCGTATCCAGCAGGGATCGGATTGCCGAAGCAA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1751 ATAGCGCCGATAGCCTCGCGTATCCAGCAGGGATCGGATTGCCGAAGCAA   1800

BSNT_03148___   1801 TTTTATATTCGCTATCACAGTTATCCATATGTATTCTCTTTGCTGGCTGT   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1801 TTTTATATTCGCTATCACAGTTATCCATATGTATTCTCTTTGCTGGCTGT   1850

BSNT_03148___   1851 CGGGAAATATTTAGATTCTATTGAAAAGGAGACAGCAAATGAAACGTGA   1899
                     ||||||.||||||||||||||||||||||||||||||||||||||||||
BSU19320___sq   1851 CGGGAAGTATTTAGATTCTATTGAAAAGGAGACAGCAAATGAAACGTGA   1899


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.