Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03143 and BSU19290

See Amino acid alignment / Visit BSNT_03143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:37
# Commandline: needle
#    -asequence dna-align/BSNT_03143___yozO.1.22522.seq
#    -bsequence dna-align/BSU19290___yozO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03143___yozO-BSU19290___yozO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03143___yozO-BSU19290___yozO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: BSU19290___yozO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     342/345 (99.1%)
# Similarity:   342/345 (99.1%)
# Gaps:           0/345 ( 0.0%)
# Score: 1698.0
# 
#
#=======================================

BSNT_03143___      1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19290___yo      1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC     50

BSNT_03143___     51 TTTGCTCGTTGAAGGGGAAAGAATAGAATCGATTTATAAGCTCCGAGTGG    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19290___yo     51 TTTGCTCGTTGAAGGGGAAAGAATTGAATCGATTTATAAGCTCCGAGTGG    100

BSNT_03143___    101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAAAATG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19290___yo    101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAAAATG    150

BSNT_03143___    151 TTTTCTAAAAAGAAGGTTCGTGTATTTCTTCCATATAAAACAATTGAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19290___yo    151 TTTTCTAAAAAGAAGGTTCGTGTATTTCTTCCATATAAAACAATTGAAAG    200

BSNT_03143___    201 CTTTGCCATTCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCTTTTAT    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU19290___yo    201 CTTTGCCATCCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCTTTTAT    250

BSNT_03143___    251 TGATGACAAGAAGCAAAACGTTCGAATTAGAATTTGCGAAAGACACCGAT    300
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU19290___yo    251 TGATGACAAGAAGCAAAACTTTCGAATTAGAATTTGCGAAAGACACCGAT    300

BSNT_03143___    301 TTAAGCGAGGTTCAGGCGGTGCTGACAAAGCATTTGTGCAGCTGA    345
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU19290___yo    301 TTAAGCGAGGTTCAGGCGGTGCTGACAAAGCATTTGTGCAGCTGA    345


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