Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03141 and BSU19280

See Amino acid alignment / Visit BSNT_03141 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence dna-align/BSNT_03141___yocN.1.22522.seq
#    -bsequence dna-align/BSU19280___yocN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03141___yocN-BSU19280___yocN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03141___yocN-BSU19280___yocN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03141___yocN
# 2: BSU19280___yocN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity:     228/234 (97.4%)
# Similarity:   228/234 (97.4%)
# Gaps:           0/234 ( 0.0%)
# Score: 1116.0
# 
#
#=======================================

BSNT_03141___      1 ATGTTCTTTTCTCCCTCCGTCGTGAATGTCGGCGGATTTAAAATCAATAC     50
                     |||||||||||.|||||||||||.||||||||||||||||||||||||||
BSU19280___yo      1 ATGTTCTTTTCACCCTCCGTCGTAAATGTCGGCGGATTTAAAATCAATAC     50

BSNT_03141___     51 AATGGACCGTGGTTCCTCTTTAACACTCGGTCCGTATCAGCAGGTCGATT    100
                     .|||||.||.||||||||||||||||||||||||||||||||||||||||
BSU19280___yo     51 GATGGATCGAGGTTCCTCTTTAACACTCGGTCCGTATCAGCAGGTCGATT    100

BSNT_03141___    101 ACTTTTTATCAGCTAAAATAAATCAAGGGTTTGGAGAAGAAAATGGCGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19280___yo    101 ACTTTTTATCAGCTAAAATAAATCAAGGGTTTGGAGAAGAAAATGGCGAC    150

BSNT_03141___    151 TTTACTCCTCTTGTCGTACCGATTTCAAATGTATTAGATGCAGATCTTGT    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU19280___yo    151 TTTACTCCTCTTGTCGTGCCGATTTCAAATGTATTAGATGCAGATCTTGT    200

BSNT_03141___    201 TGATTCGAACTCAGCGAAAAACAGTGTGGTGTAA    234
                     ||||||||||||||||||||||||||||||||||
BSU19280___yo    201 TGATTCGAACTCAGCGAAAAACAGTGTGGTGTAA    234


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.