Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03139 and BSU19260

See Amino acid alignment / Visit BSNT_03139 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence dna-align/BSNT_03139___yocM.1.22522.seq
#    -bsequence dna-align/BSU19260___yocM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03139___yocM-BSU19260___yocM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03139___yocM-BSU19260___yocM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03139___yocM
# 2: BSU19260___yocM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     473/477 (99.2%)
# Similarity:   473/477 (99.2%)
# Gaps:           0/477 ( 0.0%)
# Score: 2349.0
# 
#
#=======================================

BSNT_03139___      1 ATGGATTTCGAAAAGATGAAGCAGTGGATGGAATTCGCACAGCAGATGTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo      1 ATGGATTTCGAAAAGATGAAGCAGTGGATGGAATTCGCACAGCAGATGTA     50

BSNT_03139___     51 CGGCGGTGACTTTTGGAAACAGGTATTTGATGAAGACCAAAAAACCCCTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo     51 CGGCGGTGACTTTTGGAAACAGGTATTTGATGAAGACCAAAAAACCCCTT    100

BSNT_03139___    101 TTATGACAAATGGCCAATCTCCGTTTCCGTTTGCGCAGCAAGATCAGCGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo    101 TTATGACAAATGGCCAATCTCCGTTTCCGTTTGCGCAGCAAGATCAGCGA    150

BSNT_03139___    151 GGGAAAGGAGATGCTTCATTTCCGAGCATGGATATTGTAGATACCGTTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19260___yo    151 GGGAAAGGAGATGCTTCATTTCCGAGCATGGATATTGTAGATACCGTTGC    200

BSNT_03139___    201 GGAAGTACAATTTTTAATTTATCTTCCAGGCTACCGTAAACAAGACGTTC    250
                     ||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU19260___yo    201 GGAAGTGCAGTTTTTAATTTATCTTCCAGGCTACCGTAAACAAGACGTTC    250

BSNT_03139___    251 ACATATTATCGTACGGAGATTATTTAGTGGTGAAGGGGCAGCGCTTTTCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo    251 ACATATTATCGTACGGAGATTATTTAGTGGTGAAGGGGCAGCGCTTTTCC    300

BSNT_03139___    301 TATTTTAATGAACAGGACTTTCGCCAAAAAGAAGGGAGATACGGAAGTTT    350
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19260___yo    301 TATTTTAATGAACAGGACTTTCGCCAAAAAGAAGGGAAATACGGAAGTTT    350

BSNT_03139___    351 TGAAAAGAAAATTCCGCTTTCCGATCATCTTCATGGAAAGATGAATGCCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo    351 TGAAAAGAAAATTCCGCTTTCCGATCATCTTCATGGAAAGATGAATGCCA    400

BSNT_03139___    401 TTTTTAAAGACGGAATCCTATACATCACTATTCAAAAAGACGAAGGTCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19260___yo    401 TTTTTAAAGACGGAATCCTATACATCACTATTCAAAAAGACGAAGGTCAA    450

BSNT_03139___    451 GCGAAAACCATTGTTATTGATGATTGA    477
                     |||||||||||||||||||||||||||
BSU19260___yo    451 GCGAAAACCATTGTTATTGATGATTGA    477


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