Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03128 and BSU19200

See Amino acid alignment / Visit BSNT_03128 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence dna-align/BSNT_03128___yocG.1.22522.seq
#    -bsequence dna-align/BSU19200___desR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03128___yocG-BSU19200___desR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-BSU19200___desR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: BSU19200___desR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     595/600 (99.2%)
# Similarity:   595/600 (99.2%)
# Gaps:           0/600 ( 0.0%)
# Score: 2955.0
# 
#
#=======================================

BSNT_03128___      1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de      1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT     50

BSNT_03128___     51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de     51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA    100

BSNT_03128___    101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAACGCCAGCCTGATGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAACGCCAGCCTGATGTA    150

BSNT_03128___    151 TGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    151 TGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCTGA    200

BSNT_03128___    201 GGAGCTAAAAGATACAGGCTGCAAAATTATCATCTTAACCACCTTCGCCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    201 GGAGCTAAAAGATACAGGCTGCAAAATTATCATCTTAACCACCTTCGCCA    250

BSNT_03128___    251 GACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTATTTG    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU19200___de    251 GACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGCGTTAAAGGCTATTTG    300

BSNT_03128___    301 TTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCGTCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    301 TTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCGTCAT    350

BSNT_03128___    351 GAACGGAAAACGAATCTATGCACCTGAGCTGATGGAGGACTTATACAGCG    400
                     ||||||||||||.||||||||||||||.||||||||||||||||||||||
BSU19200___de    351 GAACGGAAAACGCATCTATGCACCTGAACTGATGGAGGACTTATACAGCG    400

BSNT_03128___    401 AAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGTGGCT    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19200___de    401 AAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTCGAACTTGTGGCT    450

BSNT_03128___    451 GACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAAGCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    451 GACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAAGCGG    500

BSNT_03128___    501 GACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTGAAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19200___de    501 GACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTGAAAA    550

BSNT_03128___    551 ATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAAATAA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU19200___de    551 ATCGAATTGAAGCCATTACCCGGTCAAAAGAAAAAGGCTGGTTTAAATAA    600


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