Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03125 and BSU19180

See Amino acid alignment / Visit BSNT_03125 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence dna-align/BSNT_03125___des.1.22522.seq
#    -bsequence dna-align/BSU19180___des.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03125___des-BSU19180___des.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03125___des-BSU19180___des.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03125___des
# 2: BSU19180___des
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1059
# Identity:    1054/1059 (99.5%)
# Similarity:  1054/1059 (99.5%)
# Gaps:           0/1059 ( 0.0%)
# Score: 5250.0
# 
#
#=======================================

BSNT_03125___      1 ATGACTGAACAAACCATTGCACATAAACAAAAACAGCTGACAAAGCAAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de      1 ATGACTGAACAAACCATTGCACATAAACAAAAACAGCTGACAAAGCAAGT     50

BSNT_03125___     51 CGCTGCATTTGCTCAGCCTGAAACAAAAAACAGCCTGATTCAGCTTTTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de     51 CGCTGCATTTGCTCAGCCTGAAACAAAAAACAGCCTGATTCAGCTTTTAA    100

BSNT_03125___    101 ACACGTTTATCCCATTCTTCGGCCTATGGTTTCTTGCTTATCTCAGCCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    101 ACACGTTTATCCCATTCTTCGGCCTATGGTTTCTTGCTTATCTCAGCCTC    150

BSNT_03125___    151 GATGTCTCCTATCTTCTTACGTTAGCATTAACGGTGATTGCCGCAGGTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    151 GATGTCTCCTATCTTCTTACGTTAGCATTAACGGTGATTGCCGCAGGTTT    200

BSNT_03125___    201 TCTGACAAGAATTTTTATCATCTTCCATGACTGCTGCCATCAATCTTTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    201 TCTGACAAGAATTTTTATCATCTTCCATGACTGCTGCCATCAATCTTTTT    250

BSNT_03125___    251 TCAAACAAAAACGCTATAACCACATTCTCGGTTTTCTGACAGGTGTCCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    251 TCAAACAAAAACGCTATAACCACATTCTCGGTTTTCTGACAGGTGTCCTG    300

BSNT_03125___    301 ACTTTATTCCCGTATCTTCAATGGCAGCACAGCCATTCGATTCATCATGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    301 ACTTTATTCCCGTATCTTCAATGGCAGCACAGCCATTCGATTCATCATGC    350

BSNT_03125___    351 GACTAGCAGCAATCTGGATAAACGCGGAACAGGAGACATCTGGATGTTAA    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    351 AACTAGCAGCAATCTGGATAAACGCGGAACAGGAGACATCTGGATGTTAA    400

BSNT_03125___    401 CAGTAAACGAATATAAAGCTGCATCCAGACGAACAAAGCTTGCATACAGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    401 CAGTAAACGAATATAAAGCTGCATCCAGACGAACAAAGCTTGCATACAGA    450

BSNT_03125___    451 CTTTATAGAAACCCGTTTATCATGTTTATTCTCGGACCGATTTATGTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    451 CTTTATAGAAACCCGTTTATCATGTTTATTCTCGGACCGATTTATGTTTT    500

BSNT_03125___    501 TCTGATCACGAACCGTTTTAACAAAAAAGGCGCAAGACGCAAGGAACGTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    501 TCTGATCACGAACCGTTTTAACAAAAAAGGCGCAAGACGCAAGGAACGTG    550

BSNT_03125___    551 TAAACACATACCTTACGAATCTGGCAATTGTCGCGTTGGCTGCCGCTTGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    551 TAAACACATACCTTACGAATCTGGCAATTGTCGCGTTGGCTGCCGCTTGC    600

BSNT_03125___    601 TGTCTGATCTTTGGCTGGCAATCGTTTTTACTGGTGCAAGGCCCGATATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    601 TGTCTGATCTTTGGCTGGCAATCGTTTTTACTGGTGCAAGGCCCGATATT    650

BSNT_03125___    651 TCTGATTTCAGGTTCAATCGGTGTTTGGCTCTTTTATGTGCAGCATACCT    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU19180___de    651 TCTGATTTCAGGTTCAATCGGTGTTTGGCTGTTTTATGTGCAGCATACCT    700

BSNT_03125___    701 TTGAAGATTCTTATTTTGAAGCGGATGAAAACTGGAGCTACGTTCAGGCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    701 TTGAAGATTCTTATTTTGAAGCGGATGAAAACTGGAGCTACGTTCAGGCT    750

BSNT_03125___    751 GCTGTTGAAGGCAGTTCATTTTATAAACTCCCGAAACTGCTTCAATGGCT    800
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU19180___de    751 GCTGTTGAAGGCAGCTCATTTTATAAACTCCCGAAACTGCTTCAATGGCT    800

BSNT_03125___    801 AACAGGCAATATTGGTTACCACCACGTTCATCATTTGAGTCCAAAGGTGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    801 AACAGGCAATATTGGTTACCACCACGTTCATCATTTGAGTCCAAAGGTGC    850

BSNT_03125___    851 CTAACTATAAGCTTGAAGTTGCTCATGAACATCACGAACCATTAAAAAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    851 CTAACTATAAGCTTGAAGTTGCTCATGAACATCACGAACCATTAAAAAAC    900

BSNT_03125___    901 GTACCGACAATCACCTTAAAAACAAGCCTGCAATCACTCGCGTTCCGTCT    950
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19180___de    901 GTACCGACAATCACCTTAAAAACAAGCCTGCAATCACTTGCGTTCCGTCT    950

BSNT_03125___    951 TTGGGATGAAGATAACAAACAGTTTGTGTCATTTCGGGCTATAAAACATA   1000
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de    951 ATGGGATGAAGATAACAAACAGTTTGTGTCATTTCGGGCTATAAAACATA   1000

BSNT_03125___   1001 TACCTGTAAGCCTTCCGCCTGATTCACCAGAAAAACAGAAGCTGCGGAAG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19180___de   1001 TACCTGTAAGCCTTCCGCCTGATTCACCAGAAAAACAGAAGCTGCGGAAG   1050

BSNT_03125___   1051 AATGCCTGA   1059
                     |||||||||
BSU19180___de   1051 AATGCCTGA   1059


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