Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03121 and BSU19160

See Amino acid alignment / Visit BSNT_03121 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence dna-align/BSNT_03121___yocC.1.22522.seq
#    -bsequence dna-align/BSU19160___yocC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03121___yocC-BSU19160___yocC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03121___yocC-BSU19160___yocC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03121___yocC
# 2: BSU19160___yocC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     490/498 (98.4%)
# Similarity:   490/498 (98.4%)
# Gaps:           0/498 ( 0.0%)
# Score: 2418.0
# 
#
#=======================================

BSNT_03121___      1 TTGTTTACTATTAAAGAAAAAAATCGTCAAGAGCTTGAAGAAGAACTAAA     50
                     |||||||||.||||||||||||||||||||||||||||.|||||||||||
BSU19160___yo      1 TTGTTTACTGTTAAAGAAAAAAATCGTCAAGAGCTTGAGGAAGAACTAAA     50

BSNT_03121___     51 TGATTTAGAATTTCAAATTTATCGCATGCAGGAGAATATGAAGGATTTGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19160___yo     51 TGATTTAGAATTTCAAATTTATCGCATGCAGGAGAATATGAAGGATTTAT    100

BSNT_03121___    101 CTAAAGATGCCAAAGTGCTTGGTATTGATCAATCGAAACATGATGAGTGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19160___yo    101 CTAAAGATGCCAAAGTGCTTGGTATTGATCAATCGAAACATGATGAGTGG    150

BSNT_03121___    151 ATGATTGTTTCCTCGATTGATGATGGCCAAACATGCAAAATTATGCTAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19160___yo    151 ATGATTGTTTCCTCGATTGATGATGGCCAAACATGCAAAATTATGCTAAC    200

BSNT_03121___    201 TGATTGTAAAACGGCTTACCGAGGAAAAGGCTGTTTTTCACTTGTAGCGT    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU19160___yo    201 TGATTGTAAAACGGCATACCGAGGAAAAGGCTGTTTTTCACTTGTAGCGT    250

BSNT_03121___    251 CTTACAAGGACGATGCCATTCATATAGGGGATATAAAAGGCCCTCCGAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19160___yo    251 CTTACAAGGACGATGCCATTCATATAGGGGATATAAAAGGCCCTCCGAAT    300

BSNT_03121___    301 CACGGGTTTGGTTCCATTTGCATGAAATATTTAAAAGATATAGCAAGAGA    350
                     |||||||||||.|||||||||||||||||||||||||||||.||||||||
BSU19160___yo    301 CACGGGTTTGGCTCCATTTGCATGAAATATTTAAAAGATATTGCAAGAGA    350

BSNT_03121___    351 CCACAATATACCGAAAGTCACCGGAGACATCGCCAAACGGGATTGGAATC    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19160___yo    351 CCATAATATACCGAAAGTCACCGGAGACATCGCCAAACGGGATTGGAATC    400

BSNT_03121___    401 ATGTAGACCGGCTGATTCACTTTTATGAAAAACATCAATTCAAAGTATGT    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19160___yo    401 ATGTAGACCGGCTGATTCACTTTTATGAAAAACATCACTTCAAAGTATGT    450

BSNT_03121___    451 ATCGATCATGATACCCAATCCGGCAGCATTAAGTGGGTTGATTTGTAA    498
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU19160___yo    451 ATCGATCATGATACCCAATCCGGCAGCATTAAGTGGGTTGATTTGTAA    498


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