Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03111 and BSU19110

See Amino acid alignment / Visit BSNT_03111 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence dna-align/BSNT_03111___yobW.1.22522.seq
#    -bsequence dna-align/BSU19110___yobW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03111___yobW-BSU19110___yobW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03111___yobW-BSU19110___yobW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03111___yobW
# 2: BSU19110___yobW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     540/546 (98.9%)
# Similarity:   540/546 (98.9%)
# Gaps:           0/546 ( 0.0%)
# Score: 2676.0
# 
#
#=======================================

BSNT_03111___      1 ATGCATCTTACACTTCAGAGCGTTTATCCTGCCATGATCATCATCTTTTT     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU19110___yo      1 ATGCATCTTACACTTCAGAGCGTTTATCCTGCCATAATCATCATCTTTTT     50

BSNT_03111___     51 TCTGTATAAAAAAATTAAAAGGTCCATCGGATACCAGCCGCTGAAGCCCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo     51 TCTGTATAAAAAAATTAAAAGGTCCATCGGATACCAGCCGCTGAAGCCCC    100

BSNT_03111___    101 GCTGGCTGTTCACCCGTATCATTCTTTTCTCGCTGTTTGCTTTTGGCCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU19110___yo    101 GCTGGCTGTTCACCCGTATCATTCTTTTCTCGCTGTTTGCTTTTGGACTT    150

BSNT_03111___    151 TCAATCTTCAGCGCCATTCACCCTTTTTTATATGGATATCTCATTTTGGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo    151 TCAATCTTCAGCGCCATTCACCCTTTTTTATATGGATATCTCATTTTGGG    200

BSNT_03111___    201 CATTCTTGGCGGATGGCTCCTTGTCTTTTTCGCTAAGAAAAACATCTCCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19110___yo    201 CATTCTTGGCGGATGGCTCCTTGTCTTTTTCGCTAAGAAAAACATCTCTT    250

BSNT_03111___    251 TTGAAAAACGCAGAGGAAAGATCTATTTTCGGACTCATATTTGGGTAGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo    251 TTGAAAAACGCAGAGGAAAGATCTATTTTCGGACTCATATTTGGGTAGAG    300

BSNT_03111___    301 GTGATTCTCTTAACTTTATTTCTATCAAGATTTCTGTATCGAGTGACGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo    301 GTGATTCTCTTAACTTTATTTCTATCAAGATTTCTGTATCGAGTGACGGA    350

BSNT_03111___    351 GCTTTATCTTACCTCACCTGATCTAAACAGCCTTGGATCATACAGTCAGT    400
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU19110___yo    351 GCTTTATCTTACCTCACCTGATCTAAACCGCCTTGGATCATACAGTCAGT    400

BSNT_03111___    401 CAATCGGAACGGACCCTCTGACAATTGGCGTCTGTTTTCTGATAGCCGTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo    401 CAATCGGAACGGACCCTCTGACAATTGGCGTCTGTTTTCTGATAGCCGTT    450

BSNT_03111___    451 TATTATATCGGTTTTTCTTCTTTTGTCATCAAGCTCAGCAGAAACGAACT    500
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19110___yo    451 TATTATATCGGTTTTTCTTCTTTTATCATCAAGCTCAGCAGAAACGAACT    500

BSNT_03111___    501 CGAACAGCACGAATACAATAAAGAAAAAGACATCCTTGCCCGCTAA    546
                     .|||||||||||||||||||||||||||||||||||||||||||||
BSU19110___yo    501 TGAACAGCACGAATACAATAAAGAAAAAGACATCCTTGCCCGCTAA    546


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