Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03103 and BSU19050
See
Amino acid alignment /
Visit
BSNT_03103 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence dna-align/BSNT_03103___yobQ.1.22522.seq
# -bsequence dna-align/BSU19050___yobQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03103___yobQ-BSU19050___yobQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03103___yobQ-BSU19050___yobQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03103___yobQ
# 2: BSU19050___yobQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity: 705/726 (97.1%)
# Similarity: 705/726 (97.1%)
# Gaps: 6/726 ( 0.8%)
# Score: 3465.0
#
#
#=======================================
BSNT_03103___ 1 ------ATGGATTCGCTTCAAGAGATGATTTGCGAAAAACGGACATACAC 44
|||||.||||||||||||||.|||||||||||||||||||||||
BSU19050___yo 1 TTGCTAATGGACTCGCTTCAAGAGATAATTTGCGAAAAACGGACATACAC 50
BSNT_03103___ 45 ACGCCTTTATCATTCACATAAGCACGCATACAGCCAATTTCTTTTTCCGC 94
|||.||.||||||||||||||||||||.||||||||||||||||||||||
BSU19050___yo 51 ACGGCTATATCATTCACATAAGCACGCGTACAGCCAATTTCTTTTTCCGC 100
BSNT_03103___ 95 TTGAAGGGAGTATTGATCTTGAGACTGAAGAGCGCCAGGTGAAATTAAAG 144
||||||||||||||||||||||||||||.|.||||||||||||||||||.
BSU19050___yo 101 TTGAAGGGAGTATTGATCTTGAGACTGAGGGGCGCCAGGTGAAATTAAAT 150
BSNT_03103___ 145 CCAGATCATTTTTTATATATTCCGCCGGAGTGCGAGCATCGTTTCCGTTC 194
||.||||||||||||||||||||||||.|||||||||||||.||||||||
BSU19050___yo 151 CCGGATCATTTTTTATATATTCCGCCGCAGTGCGAGCATCGCTTCCGTTC 200
BSNT_03103___ 195 TATCGGAAGAAATGAATGTCTTGTACTGGATGTTCCGCTTCATGCAATGA 244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 201 TATCGGAAGAAATGAATGTCTTGTACTGGATGTTCCGCTTCATGCAATGA 250
BSNT_03103___ 245 AAATTGATGAGTATCGTGCAGGATCGGGAATTGAAGCTGCACTCGATCCT 294
|||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU19050___yo 251 AAATTGATGAGTATCGTGCAGGATCAGGAATTGAAGCTGCCCTCGATCCT 300
BSNT_03103___ 295 TTCTGGTCTTCGATCAGGTACTTGCTGACAGAGGAAGCAAAGGCCGGAAC 344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 301 TTCTGGTCTTCGATCAGGTACTTGCTGACAGAGGAAGCAAAGGCCGGAAC 350
BSNT_03103___ 345 AGCCAACTCGCTTCATATGCTAGTACAATACATAAAAGAAAAGCTTCAAT 394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 351 AGCCAACTCGCTTCATATGCTAGTACAATACATAAAAGAAAAGCTTCAAT 400
BSNT_03103___ 395 CCCATAGCTATGCCTCAATTGCATACATTCACAGCCATTTATTTGAGCGG 444
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 401 CCCATAGCTATGCCTCAATTGCATACATTCACAGCCATTTATTTGAGCGG 450
BSNT_03103___ 445 CTGACGATTAAGAAGCTGGCAGAAATCGAGCATTATCACCCAGCTTACTA 494
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 451 CTGACGATTAAGAAGCTGGCAGAAATCGAGCATTATCACCCAGCTTACTA 500
BSNT_03103___ 495 TTCAAGCTGGTTCAAAAAACAGACAGGGAAGTCCCCGCAGAACTATATTG 544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 501 TTCAAGCTGGTTCAAAAAACAGACAGGGAAGTCCCCGCAGAACTATATTG 550
BSNT_03103___ 545 CCGACCTTCGCCTTGAGGAAGCAAAACGAATGCTGATGGAGAGAAATGAA 594
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19050___yo 551 CCGACCTTCGCCTTGAGGAAGCAAAAAGAATGCTGATGGAGAGAAATGAA 600
BSNT_03103___ 595 ACCCTTACCGTCGTGAGCGAGGCGCTGGGCTTTCAAAACCTTTCTTCTTT 644
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 601 ACTCTTACCGTCGTGAGCGAGGCGCTGGGCTTTCAAAACCTTTCTTCTTT 650
BSNT_03103___ 645 TACAAGATGGTTCACGAAAAGCACAGGAATGCCGCCCCGCCTGTATCGAA 694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo 651 TACAAGATGGTTCACGAAAAGCACAGGAATGCCGCCCCGCCTGTATCGAA 700
BSNT_03103___ 695 ACACCTTATATTCGGATAAAAAATGA 720
||||||||||||||||||||||||||
BSU19050___yo 701 ACACCTTATATTCGGATAAAAAATGA 726
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.