Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03102 and BSU19040

See Amino acid alignment / Visit BSNT_03102 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence dna-align/BSNT_03102___csaA.1.22522.seq
#    -bsequence dna-align/BSU19040___csaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03102___csaA-BSU19040___csaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03102___csaA-BSU19040___csaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03102___csaA
# 2: BSU19040___csaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     329/333 (98.8%)
# Similarity:   329/333 (98.8%)
# Gaps:           0/333 ( 0.0%)
# Score: 1629.0
# 
#
#=======================================

BSNT_03102___      1 ATGGCAGTTATTGAAGACTTTGAGAAATTGGATATCAGAACGGGAACAAT     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU19040___cs      1 ATGGCAGTTATTGATGACTTTGAGAAATTGGATATCAGAACGGGAACAAT     50

BSNT_03102___     51 TGTAAAAGCGGAAGAATTTCCTGAAGCAAGGGTACCGGCTATCAAGCTTG    100
                     ||||||||||||||||||||||||||||||.||||||||.||||||||||
BSU19040___cs     51 TGTAAAAGCGGAAGAATTTCCTGAAGCAAGAGTACCGGCAATCAAGCTTG    100

BSNT_03102___    101 TGATAGATTTTGGGACTGAAATCGGCATAAAACAATCGAGCGCACAAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19040___cs    101 TGATAGATTTTGGGACTGAAATCGGCATAAAACAATCGAGCGCACAAATC    150

BSNT_03102___    151 ACGAAGCGTTACAAGCCGGAAGGTCTCATCAACAAGCAAGTCATAGCAGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19040___cs    151 ACGAAGCGTTACAAGCCGGAAGGTCTCATCAACAAGCAAGTCATAGCAGT    200

BSNT_03102___    201 CGTGAACTTTCCGCCCCGCCGAATCGCCGGATTTAAATCGGAAGTCTTGG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU19040___cs    201 CGTGAACTTTCCGCCCCGCCGGATCGCCGGATTTAAATCGGAAGTCTTGG    250

BSNT_03102___    251 TCCTCGGCGGCATACCCGGCCAGGGCGACGTCGTCCTTTTGCAGCCGGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19040___cs    251 TCCTCGGCGGCATACCCGGCCAGGGCGACGTCGTCCTTTTGCAGCCGGAT    300

BSNT_03102___    301 CAGCCTGTCCCAAACGGCACAAAAATCGGATAA    333
                     |||||||||||||||||||||||||||||||||
BSU19040___cs    301 CAGCCTGTCCCAAACGGCACAAAAATCGGATAA    333


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.