Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03100 and BSU19020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence dna-align/BSNT_03100___yobN.1.22522.seq
# -bsequence dna-align/BSU19020___yobN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03100___yobN-BSU19020___yobN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03100___yobN-BSU19020___yobN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03100___yobN
# 2: BSU19020___yobN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1425
# Identity: 1325/1425 (93.0%)
# Similarity: 1325/1425 (93.0%)
# Gaps: 84/1425 ( 5.9%)
# Score: 6561.0
#
#
#=======================================
BSNT_03100___ 1 ATGAATGATGACATGGTAAAGATCATTAGAAATGGCCTTAGCGCATCCCA 50
BSU19020___yo 0 -------------------------------------------------- 0
BSNT_03100___ 51 GCATCCAAAGCATATTCTTGTTGTAGGAGCTGGATTGTCCGGGCTTGTAT 100
||||||||||||||||
BSU19020___yo 1 ----------------------------------TTGTCCGGGCTTGTAT 16
BSNT_03100___ 101 CAGCATCATTGCTGAAAAATGCCGGTCACAGAGTAACGATTCTCGAAGCG 150
|||||||.|||.||||||||||||||||||||||||||||||||||||||
BSU19020___yo 17 CAGCATCTTTGTTGAAAAATGCCGGTCACAGAGTAACGATTCTCGAAGCG 66
BSNT_03100___ 151 AGCGGCAGAGCGGGCGGCCGTGTCTGCACTTTGAGATCTCCCTTTAGTGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 67 AGCGGCAGAGCGGGCGGCCGTGTCTGCACTTTGAGATCTCCCTTTAGTGA 116
BSNT_03100___ 201 TGATTTGTATTTCAACGCTGGCCCGATGCGCATACCGAATAACCATTCGT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 117 TGATTTGTATTTCAACGCTGGCCCGATGCGCATACCGAATAACCATTCGT 166
BSNT_03100___ 251 TAACCTTAGAATATATCAAAAAATTCAAATTTCCAACAAATGTATTTATC 300
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU19020___yo 167 TAACCTTAGAATATATCAAAAAATTCAAATTGCCAACAAATGTATTTATC 216
BSNT_03100___ 301 AACAGAACCCCGATGGACATCATTTATGCAAATGGAATCAAAACACGTCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 217 AACAGAACCCCGATGGACATCATTTATGCAAATGGAATCAAAACACGTCT 266
BSNT_03100___ 351 CCAAGTTTTTGAACGAGCTCCTGAAATATTGAGATATCCAGTTGCACCAA 400
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU19020___yo 267 CCAAGTTTTTGAACGAGCTCCTGGAATATTGAGATATCCAGTTGCACCAA 316
BSNT_03100___ 401 ATGAACAAGGGAAAACGTCTGAAGAGCTGTTGCTTTCTTTACTGCAGCCT 450
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU19020___yo 317 ATGAACAAGGGAAAACGTCTGAAGAGCTGATGCTTTCTTTACTGCAGCCT 366
BSNT_03100___ 451 ATTCTAAATTTTATCAATCAAAATCCAGCGAGAAATTGGCGGATTGTCGA 500
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU19020___yo 367 ATTCTAAATTTTATCAATCAAAATCCAGCAAGAAATTGGCGGATTGTCGA 416
BSNT_03100___ 501 AGAACAATACAAAAGTTATTCGTTAAGCTCTTTTTTAAACACGTATTTTT 550
||||||||||||||.|.|||||||||||||||||||||||||||||||||
BSU19020___yo 417 AGAACAATACAAAAATCATTCGTTAAGCTCTTTTTTAAACACGTATTTTT 466
BSNT_03100___ 551 CATATGGCGCGATCGATATGATCGGTGTGCTTTTGGATATGGAAGCGTAT 600
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU19020___yo 467 CATATGGCGCGATCGATATGATCGGTGTACTTTTGGATATGGAAGCGTAT 516
BSNT_03100___ 601 ATGGGGATGTCCCTTGTTGAAGTATTGCGGGAATCTATCTTTTTTTCATC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 517 ATGGGGATGTCCCTTGTTGAAGTATTGCGGGAATCTATCTTTTTTTCATC 566
BSNT_03100___ 651 GCCCGCTCACTTCTATGAGATAACTGGCGGTATGGATCTGCTGCCTCACG 700
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 567 CCCCGCTCACTTCTATGAGATAACTGGCGGTATGGATCTGCTGCCTCACG 616
BSNT_03100___ 701 CGTTTCTTCCTCAATTAAAAACAAACATTCTATACCATCAAAAAATGATG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 617 CGTTTCTTCCTCAATTAAAAACAAACATTCTATACCATCAAAAAATGATG 666
BSNT_03100___ 751 AAAATGTCTCAGGGTGAAAATCGTGTTACGATCCATTGTCAGCATCAACA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 667 AAAATGTCTCAGGGTGAAAATCGTGTTACGATCCATTGTCAGCATCAACA 716
BSNT_03100___ 801 AACGGCAGAATTCACATCATTCACGGCTGATCTCGCTATTGTAACCATTC 850
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU19020___yo 717 AACGGCAGAATTCACATCATTCACAGCTGATCTCGCTATTGTAACCATTC 766
BSNT_03100___ 851 CTTTTTCAACATTGCGATTTGTAAAAGACGAACCATACCATTCATTCTCT 900
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU19020___yo 767 CTTTTTCAACATTGCGATTTGTAAAAGTCGAACCATACCATTCATTCTCT 816
BSNT_03100___ 901 TACTATAAACGGAGGGCCATCCGTGAGCTAAACTATATCAGTGCAACAAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 817 TACTATAAACGGAGGGCCATCCGTGAGCTAAACTATATCAGTGCAACAAA 866
BSNT_03100___ 951 AATCGGCATAGAGTTTAAAAGCCGATTTTGGGAAAAAGCCGGGCAGCGCG 1000
||||||||||||||||||||||||||||||||||||||||||.||||.||
BSU19020___yo 867 AATCGGCATAGAGTTTAAAAGCCGATTTTGGGAAAAAGCCGGTCAGCACG 916
BSNT_03100___ 1001 GCGGCAAATCTATTACTGATCTTCCGATTCGTTTTTCATATTATCCAAGC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 917 GCGGCAAATCTATTACTGATCTTCCGATTCGTTTTTCATATTATCCAAGC 966
BSNT_03100___ 1051 AGAAATATTGGAGCAAATGGACATGCTGTCATTCTGGTCAGCTATACATG 1100
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU19020___yo 967 AGAAATATTGGAGCAAATGGACATGCTGTCATTCTGGCCAGCTATACATG 1016
BSNT_03100___ 1101 GGCCGATGAGGCACTGATATGGGACAGTCTTTCAGAAGGAGAGCGAATCC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 1017 GGCCGATGAGGCACTGATATGGGACAGTCTTTCAGAAGGAGAGCGAATCC 1066
BSNT_03100___ 1151 AGTATACTTTACTGAATTTATCTGAAATCTATGGTGATATTGTGTGGTCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 1067 AGTATACTTTACTGAATTTATCTGAAATCTATGGTGATATTGTGTGGTCT 1116
BSNT_03100___ 1201 GAATTTGTGTCTGGCGCTTCTTTTAGCTGGAGCCAGTACCCGTATTCTGC 1250
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU19020___yo 1117 GAATTTGTGTCTGGCACTTCTTTTAGCTGGAGCCAGTACCCGTATTCTGC 1166
BSNT_03100___ 1251 GGGAGGTTTTACAGCTTTCGAACCAGGACAAGAATTAGAGCTGTATCCCT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 1167 GGGAGGTTTTACAGCTTTCGAACCAGGACAAGAATTAGAGCTGTATCCCT 1216
BSNT_03100___ 1301 ATATTCCTGTCCCTGAGGGCAGAGTTCATTTCGCCGGAGAACACGCCTCA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 1217 ATATTCCTGTCCCTGAGGGCAGAGTTCATTTCGCCGGAGAACACGCCTCA 1266
BSNT_03100___ 1351 CTCACTCATGCGTGGATGCAAGGCGCGATTGAATCTGGAATACGTGTTGC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19020___yo 1267 CTCACTCATGCGTGGATGCAAGGCGCGATTGAATCTGGAATACGTGTTGC 1316
BSNT_03100___ 1401 TTATGAGGTCAATCGCTTACCTTAG 1425
|||||||||||||||||||||||||
BSU19020___yo 1317 TTATGAGGTCAATCGCTTACCTTAG 1341
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