Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03099 and BSU19010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:33
# Commandline: needle
# -asequence dna-align/BSNT_03099___yokH.1.22522.seq
# -bsequence dna-align/BSU19010___yobM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03099___yokH-BSU19010___yobM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03099___yokH-BSU19010___yobM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03099___yokH
# 2: BSU19010___yobM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 547/606 (90.3%)
# Similarity: 547/606 (90.3%)
# Gaps: 42/606 ( 6.9%)
# Score: 2667.0
#
#
#=======================================
BSNT_03099___ 1 TTGGAATTTGAAAGGTTATTGTTAAAAGGAAATAAAGGGGTGATGTATGT 50
||||||||
BSU19010___yo 1 ------------------------------------------ATGTATGT 8
BSNT_03099___ 51 GACTAACTTTGTTCATAAGACTGTAAATGGCTTGAAAAGTCTTTTAGATG 100
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19010___yo 9 GACTAACTTTGTTCATAAGACTGTAAATGGCTTGAAAAGTCTTTTAGACG 58
BSNT_03099___ 101 AAAAAGGAGCCATTCAATTGTTTTGTTCTGAAGGAGATACCATGGAATGC 150
||||||||||||||.|||||||||||||.|||||.||||.||||||.|.|
BSU19010___yo 59 AAAAAGGAGCCATTAAATTGTTTTGTTCAGAAGGTGATATCATGGAGTTC 108
BSNT_03099___ 151 CTTGTTACTTTTTCACCGGACAAAGCAACCCTTAACGACATTCAAAGCTT 200
||||||||||||||||.|||||||||||||||.||.||||||||||||||
BSU19010___yo 109 CTTGTTACTTTTTCACAGGACAAAGCAACCCTGAATGACATTCAAAGCTT 158
BSNT_03099___ 201 TGAAGCTAAACATCAGATTACACTTCCAGAGGATTATCAGAAGTTCATGA 250
|||.||||||||.|||.||||.||||||.|||||||||||||||||||||
BSU19010___yo 159 TGAGGCTAAACACCAGCTTACCCTTCCACAGGATTATCAGAAGTTCATGA 208
BSNT_03099___ 251 CACTGCATAACGGTGCGAAAATTTTTGAGATTCTTTCTGATGGGGAGAAT 300
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 209 CACTACATAACGGTGCGAAAATTTTTGAGATTCTTTCTGATGGGGAGAAT 258
BSNT_03099___ 301 ATAGGTGGAGGACTTCAGCTATTTAGCCTTGAAGAGATTGAAGAGGAGTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 259 ATAGGTGGAGGACTTCAGCTATTTAGCCTTGAAGAGATTGAAGAGGAGTT 308
BSNT_03099___ 351 AAAATATGAGGATTTGTTTGAAGATATCAATGGTATTCCAATTGGCTACT 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 309 AAAATATGAAGATTTGTTTGAAGATATCAATGGTATTCCAATTGGCTACT 358
BSNT_03099___ 401 TATTGGAAGAATGCCATTTAATGATCGATAAAGATAAAGTGAACCAAGGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 359 TATTGGAAGAATGCCATTTAATGATCGATAAAGATAAAGTGAACCAAGGT 408
BSNT_03099___ 451 GATCCCAACTATCTCTATATATTTGAAAGTGGTTTAGAATATAATCCATT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 409 GATCCCAACTATCTCTATATATTTGAAAGTGGTTTAGAATATAATCCATT 458
BSNT_03099___ 501 AAATTTAAACTTTGAAAAATTTTTAGACCGGTATATATTGGCCAATGGGG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 459 AAATTTAAACTTTGAAAAATTTTTAGACCGGTATATATTGGCCAATGGGG 508
BSNT_03099___ 551 AACCTTTTTGGGATTGGCGCTACTATACCGCAGAAAATTATTATAGAACA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19010___yo 509 AACCTTTTTGGGATTGGCGCTACTATACCGCAGAAAATTATTATAGAACA 558
BSNT_03099___ 601 AGATAG 606
||||||
BSU19010___yo 559 AGATAG 564
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