Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03071 and BSU18510

See Amino acid alignment / Visit BSNT_03071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence dna-align/BSNT_03071.1.22522.seq
#    -bsequence dna-align/BSU18510___yoxC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03071-BSU18510___yoxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03071-BSU18510___yoxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03071
# 2: BSU18510___yoxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     227/309 (73.5%)
# Similarity:   227/309 (73.5%)
# Gaps:          66/309 (21.4%)
# Score: 1071.0
# 
#
#=======================================

BSNT_03071         0 --------------------------------------------------      0
                                                                       
BSU18510___yo      1 ATGATTATAGTTTATATCAGTCTTGCAGTATTAGCAGTTTCTATTATCTT     50

BSNT_03071         1 -------------GTGATTCAAAACAAGAAAAAAATGGACCCTGCACTAA     37
                                  |||||.|||||||||||||||||.|||||.|||||||
BSU18510___yo     51 CTTAGGAGTTACCGTGATCCAAAACAAGAAAAAAATAGACCCCGCACTAA    100

BSNT_03071        38 AGGAGCTTTCCTCTGTTACGCAGGCTATGCAAAAACAAATCGAAGGATTA     87
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18510___yo    101 AGGAGCTTTCCTCTGTTACGCAGGCTATGCAAAAACAAATCGAAGGATTA    150

BSNT_03071        88 AAAACAGTAACAGAGCTGCTGACGCAAAAACAAAAGAAGGTTCAGCAGGA    137
                     |||||||.|||||||||||||||||||||||||||||||.||||||||||
BSU18510___yo    151 AAAACAGAAACAGAGCTGCTGACGCAAAAACAAAAGAAGATTCAGCAGGA    200

BSNT_03071       138 TGTCCAAATAAAAAAATACACGTTTCAGCAGACCGCAGCTGAAGTGAAAA    187
                     ||||||||||||||||||||||.||||||||||||||||||||||||||.
BSU18510___yo    201 TGTCCAAATAAAAAAATACACGCTTCAGCAGACCGCAGCTGAAGTGAAAG    250

BSNT_03071       188 AAGTTCCTAAAGCTGTTAAAGAGGTGTGGCAGGCTGGTCATTTAAATAGC    237
                     |||||||..||||.||.|||||||||||||||||.||.|||||.||||||
BSU18510___yo    251 AAGTTCCCCAAGCAGTCAAAGAGGTGTGGCAGGCAGGACATTTTAATAGC    300

BSNT_03071       238 AGGTCATGA    246
                     ||.|.|   
BSU18510___yo    301 AGATAA---    306


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