Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03039 and BSU18360

See Amino acid alignment / Visit BSNT_03039 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:26
# Commandline: needle
#    -asequence dna-align/BSNT_03039___yoxA.1.22522.seq
#    -bsequence dna-align/BSU18360___yoxA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03039___yoxA-BSU18360___yoxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03039___yoxA-BSU18360___yoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03039___yoxA
# 2: BSU18360___yoxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     966/978 (98.8%)
# Similarity:   966/978 (98.8%)
# Gaps:           0/978 ( 0.0%)
# Score: 4782.0
# 
#
#=======================================

BSNT_03039___      1 ATGGCAAACTTTATTGAAAAAATGACTTATTTGGGAACACCGGCCATCAA     50
                     |||||||||||||||||.|||||.||.|||||||||||.|||||||||||
BSU18360___yo      1 ATGGCAAACTTTATTGAGAAAATCACGTATTTGGGAACGCCGGCCATCAA     50

BSNT_03039___     51 AGCGGGCAACGAACATCTAGAAATGATTGTTGTCCCTGAGTGGGGGAGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo     51 AGCGGGCAACGAACATCTAGAAATGATTGTTGTCCCTGAGTGGGGGAGCA    100

BSNT_03039___    101 ACGTCATTTCTCTCGTGGACAAAACAACAAATGTCCAGCTTTTGCGTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    101 ACGTCATTTCTCTCGTGGACAAAACAACAAATGTCCAGCTTTTGCGTGAA    150

BSNT_03039___    151 CCGGAAACAGCAGAAAGTTTTCACGACACACCAACATTGTATGGCATTCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    151 CCGGAAACAGCAGAAAGTTTTCACGACACACCAACATTGTATGGCATTCC    200

BSNT_03039___    201 AATCCTGTTCCCGCCTAACCGCATAAGTGACGGTACATTCAGTTTCCGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    201 AATCCTGTTCCCGCCTAACCGCATAAGTGACGGTACATTCAGTTTCCGGG    250

BSNT_03039___    251 GCAGAACGTATCATTTTGATATCAACGAGAAGGATAAACACAACCATCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    251 GCAGAACGTATCATTTTGATATCAACGAGAAGGATAAACACAACCATCTT    300

BSNT_03039___    301 CACGGGTTTCTTTACCATGAAAAGTGGAATGTCGTGACCACGAAGCAAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    301 CACGGGTTTCTTTACCATGAAAAGTGGAATGTCGTGACCACGAAGCAAAC    350

BSNT_03039___    351 TGATGAAGAAGTGATTGTTGAAACAGAAATTGATCTTTCTGAGCTTCCCC    400
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    351 TGATGAAGGAGTGATTGTTGAAACAGAAATTGATCTTTCTGAGCTTCCCC    400

BSNT_03039___    401 ATGTGCAGAAGCAATTTCCTCATCATGCCGTCGTTCGGATGACATACACA    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU18360___yo    401 ATGTGCAGAAGCAATTTCCTCATCATGCCGTCGTTCGGATGACATACACG    450

BSNT_03039___    451 ATCAAGGAGAATACCCTATTTAAACATGCGACGGTCATGAACAAAGGAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    451 ATCAAGGAGAATACCCTATTTAAACATGCGACGGTCATGAACAAAGGAAA    500

BSNT_03039___    501 GGAAGCGTTTCCTTGGGGAATTGGTTATCATACTACATTTATATTTCCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    501 GGAAGCGTTTCCTTGGGGAATTGGTTATCATACTACATTTATATTTCCGG    550

BSNT_03039___    551 CAGAAAGCTCGTTATTCTCCCTGACAGCAGATCAGCAATGGGAGTTGGAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    551 CAGAAAGCTCGTTATTCTCCCTGACAGCAGATCAGCAATGGGAGTTGGAT    600

BSNT_03039___    601 GAACGCCTGCTGCCGACCGGGAAACTGATGGGTGTACCGAATAAAGAAGC    650
                     |||||||||||||||||||||||.|||||||.|||.|||.||||||||||
BSU18360___yo    601 GAACGCCTGCTGCCGACCGGGAAGCTGATGGATGTCCCGTATAAAGAAGC    650

BSNT_03039___    651 TTTGCATGAAGGAATGGATTTGCGCCACAAGCAGCTGGATGATGTCTTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    651 TTTGCATGAAGGAATGGATTTGCGCCACAAGCAGCTGGATGATGTCTTTT    700

BSNT_03039___    701 TATCTTCTTATCAGAAGAGGGGCGGAGAAAACCAGGCAGTCATTTATCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    701 TATCTTCTTATCAGAAGAGGGGCGGAGAAAACCAGGCAGTCATTTATCAT    750

BSNT_03039___    751 CAGCATGCACATATCAGCATTATTTATAAGGCAGATGAACAGTTTAAACA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    751 CAGCATGCACATATCAGCATTATTTATAAGGCAGATGAACAGTTTAAACA    800

BSNT_03039___    801 TTGGGTTGTATACAATGCGGACGGAAAACAAGGGTATTTATGCCCTGAAC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU18360___yo    801 TTGGGTTGTATACAATGCGGACGGAAAACAAGGGTATTTATGCCCTGAGC    850

BSNT_03039___    851 CTTACACATGGGTGACAAACGCAGTGAATCTTGATTTACCTTCGTCACTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    851 CTTACACATGGGTGACAAACGCAGTGAATCTTGATTTACCTTCGTCACTC    900

BSNT_03039___    901 ACTGGTTTTCAAGTGCTGGAGCCGGGAGAAGAAACGACAGCTAAAAGCAG    950
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU18360___yo    901 ACTGGTTTACAAGTGCTGGAGCCGGGAGAAGAAACGACAGCTAAAAGCAG    950

BSNT_03039___    951 TATCACCATTGAACTGAATCATCAATAG    978
                     ||||||||||||||||||||||||||||
BSU18360___yo    951 TATCACCATTGAACTGAATCATCAATAG    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03039 and BSU18360

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
