Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03015 and BSU18220

See Amino acid alignment / Visit BSNT_03015 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence dna-align/BSNT_03015___yngF.1.22522.seq
#    -bsequence dna-align/BSU18220___yngF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03015___yngF-BSU18220___yngF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03015___yngF-BSU18220___yngF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03015___yngF
# 2: BSU18220___yngF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity:     772/783 (98.6%)
# Similarity:   772/783 (98.6%)
# Gaps:           0/783 ( 0.0%)
# Score: 3816.0
# 
#
#=======================================

BSNT_03015___      1 ATGGGAGACTCTATTCTTTTTACTGTTAAAAATGAACATATGGCGTTGAT     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU18220___yn      1 ATGGGAGATTCTATTCTTTTTACTGTTAAAAATGAACATATGGCGTTGAT     50

BSNT_03015___     51 CACCTTTAACAGGCCTCAGGCAGCAAATGCTCTTTCAGCGGAAATGCTTA    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn     51 CACCTTAAACAGGCCTCAGGCAGCAAATGCTCTTTCAGCGGAAATGCTTA    100

BSNT_03015___    101 GAAACCTGCAAATGATTCTTCAGGAAATTGAATTCAACTCAAACATCCGC    150
                     |||||||||||||||||.|.||||||||||||||.||||||||||||||.
BSU18220___yn    101 GAAACCTGCAAATGATTATCCAGGAAATTGAATTTAACTCAAACATCCGT    150

BSNT_03015___    151 TGCGTCATCCTCACAGGCACCGGTGAAAAAGCGTTTTGTGCAGGGGCAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    151 TGCGTCATCCTCACAGGCACCGGTGAAAAAGCGTTTTGTGCAGGGGCAGA    200

BSNT_03015___    201 CCTAAAGGAACGGATAAAACTGAAAGAAGATCAGGTTCTGGAAAGTGTAT    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    201 CCTGAAGGAACGGATAAAACTGAAAGAAGATCAGGTTCTGGAAAGTGTAT    250

BSNT_03015___    251 CTCTCATTCAAAGAACGGCGGCTTTACTTGATGCCTTGCCGCAGCCGGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    251 CTCTCATTCAAAGAACGGCGGCTTTACTTGATGCCTTGCCGCAGCCGGTC    300

BSNT_03015___    301 ATAGCTGCGATAAATGGAAGCGCATTAGGCGGCGGACTAGAATTGGCATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    301 ATAGCTGCGATAAATGGAAGCGCATTAGGCGGCGGACTAGAATTGGCATT    350

BSNT_03015___    351 GGCATGCGACCTTCGAATCGCAGCTGAATCAGCTGTGCTGGGACTTCCGG    400
                     ||||||||||||||||||||||.|||||.|||||||||||||||||||||
BSU18220___yn    351 GGCATGCGACCTTCGAATCGCAACTGAAGCAGCTGTGCTGGGACTTCCGG    400

BSNT_03015___    401 AAACAGGGTTAGCTATTATCCCGGGCGCTGGAGGGACCCAAAGGCTGCCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    401 AAACAGGGTTAGCTATTATCCCGGGCGCTGGAGGGACCCAAAGGCTGCCC    450

BSNT_03015___    451 CGGCTGATTGGCAGAGGAAAAGCAAAAGAATTCATTTATACAGGCAGACG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    451 CGGCTGATTGGCAGAGGAAAAGCAAAAGAATTCATTTATACAGGCAGACG    500

BSNT_03015___    501 CGTGACCGCACACGAAGCAAAAGAAATCGGCCTTGTAGAGCATGTCACGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    501 CGTGACCGCACACGAAGCAAAAGAAATCGGCCTTGTAGAGCATGTCACGG    550

BSNT_03015___    551 CTCCTTGTGACCTTATGCCAAAAGCAGAGGAACTGGCCGCAGCCATTTCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    551 CTCCTTGTGACCTTATGCCAAAAGCAGAGGAACTGGCCGCAGCCATTTCT    600

BSNT_03015___    601 GCCAACGGGCCGATCGCTGTCCGTCAGGCTAAATTTGCAATCAATAAAGG    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    601 GCCAACGGACCGATCGCTGTCCGTCAGGCTAAATTTGCAATCAATAAAGG    650

BSNT_03015___    651 ATTGGAGACAGATCTCGCTACAGGCCTTGCGATTGAACAAAAAGCGTATG    700
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU18220___yn    651 ATTGGAGACAGATCTTGCTACAGGCCTTGCGATTGAACAAAAAGCGTATG    700

BSNT_03015___    701 AACAAACCATCCCGACAAAAGACAGGAGAGAAGGGCTTCAGGCCTTTCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18220___yn    701 AACAAACCATCCCGACAAAAGACAGGAGAGAAGGGCTTCAGGCCTTTCAA    750

BSNT_03015___    751 GAAAAAAGACGGGCCGTATACAAGGGAATATAA    783
                     |||||||||||||||||||||||||||||||||
BSU18220___yn    751 GAAAAAAGACGGGCCGTATACAAGGGAATATAA    783


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