Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03004 and BSU18150

See Amino acid alignment / Visit BSNT_03004 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence dna-align/BSNT_03004___ynfF.1.22522.seq
#    -bsequence dna-align/BSU18150___xynC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03004___ynfF-BSU18150___xynC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03004___ynfF-BSU18150___xynC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03004___ynfF
# 2: BSU18150___xynC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1269
# Identity:    1247/1269 (98.3%)
# Similarity:  1247/1269 (98.3%)
# Gaps:           0/1269 ( 0.0%)
# Score: 6147.0
# 
#
#=======================================

BSNT_03004___      1 ATGATTCCACGCATAAAAAAAACAATTTGTGTACTATTAGTATGTTTCAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy      1 ATGATTCCACGCATAAAAAAAACAATTTGTGTACTATTAGTATGTTTCAC     50

BSNT_03004___     51 TATGCTGTCAGTCATGTTAGGGCCAGGCGCTACTGAAGTTTTGGCAGCCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU18150___xy     51 TATGCTGTCAGTCATGTTAGGGCCAGGCGCTACTGAAGTTTTGGCAGCAA    100

BSNT_03004___    101 GTGATGTAACAGTTAATGTATCTGCAGAGAAACAAGTGATTCGCGGTTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    101 GTGATGTAACAGTTAATGTATCTGCAGAGAAACAAGTGATTCGCGGTTTT    150

BSNT_03004___    151 GGAGGGATGAACCATCCGGCTTGGGCTGGGGATCTTACAGCAGCTCAAAG    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU18150___xy    151 GGAGGGATGAATCATCCGGCTTGGGCTGGGGATCTTACAGCAGCTCAAAG    200

BSNT_03004___    201 AGAAACTGCTTTTGGCAATGAACAGAACCAGTTAGGATTTTCAATCTTAA    250
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU18150___xy    201 AGAAACTGCTTTTGGCAATGGACAGAACCAGTTAGGATTTTCAATCTTAA    250

BSNT_03004___    251 GAATTCATGTAGATGAAAATCGAAATAATTGGTATAAAGAGGTGGAGACT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    251 GAATTCATGTAGATGAAAATCGAAATAATTGGTATAAAGAGGTGGAGACT    300

BSNT_03004___    301 GCCAAGAGTGCGGTCAAACATGGGGCAATCGTTTTTGCATCTCCCTGGAA    350
                     ||.|||||||||||||||||.||.||||||||||||||.|||||.|||||
BSU18150___xy    301 GCAAAGAGTGCGGTCAAACACGGAGCAATCGTTTTTGCTTCTCCTTGGAA    350

BSNT_03004___    351 TCCTCCAAGTGATATGGTTGAGACCTTCAATCGGAATGGTGACACATCAG    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||.|
BSU18150___xy    351 TCCTCCAAGTGATATGGTTGAGACCTTTAATCGGAATGGTGACACATCGG    400

BSNT_03004___    401 CTAAGCGGCTGAAATACGATAAGTACGCCGCATACGCGCAGCATCTTAAC    450
                     ||||.||||||||||||.|.||||||||.|||||||||||||||||||||
BSU18150___xy    401 CTAAACGGCTGAAATACAACAAGTACGCAGCATACGCGCAGCATCTTAAC    450

BSNT_03004___    451 GATTTTGTTACCTTCATGAAAAATAATGGTGTGAATCTTTATGCGATTTC    500
                     ||||||||||||||||||||.||||||||||||||||||||.||||||||
BSU18150___xy    451 GATTTTGTTACCTTCATGAAGAATAATGGTGTGAATCTTTACGCGATTTC    500

BSNT_03004___    501 GGTCCAAAACGAGCCTGATTACGCTCACGAGTGGACGTGGTGGACGCCGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    501 GGTCCAAAACGAGCCTGATTACGCTCACGAGTGGACGTGGTGGACGCCGC    550

BSNT_03004___    551 AAGAAATACTTCGCTTTATGAGAGAAAACGCCGGCTCGATCAATGCCCGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    551 AAGAAATACTTCGCTTTATGAGAGAAAACGCCGGCTCGATCAATGCCCGC    600

BSNT_03004___    601 GTCATTGCACCTGAGTCTTTTCAATACTTAAAGAATTTGTCGGACCCGAT    650
                     ||||||||.||||||||.|||||||||||.||||||||||||||||||||
BSU18150___xy    601 GTCATTGCGCCTGAGTCATTTCAATACTTGAAGAATTTGTCGGACCCGAT    650

BSNT_03004___    651 CTTGAACGATCCGCAGGCTCTTGCCAATATGGATATTCTCGGAACTCACC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    651 CTTGAACGATCCGCAGGCTCTTGCCAATATGGATATTCTCGGAACTCACC    700

BSNT_03004___    701 TGTACGGCACCCAGGTCAGCCAATTCCCTTATCCTCTTTTCAAACAAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    701 TGTACGGCACCCAGGTCAGCCAATTCCCTTATCCTCTTTTCAAACAAAAA    750

BSNT_03004___    751 GGAGCGGGGAAGGACCTTTGGATGACGGAAGTATACTATCCAAACAGTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    751 GGAGCGGGGAAGGACCTTTGGATGACGGAAGTATACTATCCAAACAGTGA    800

BSNT_03004___    801 TAACAACTCGGCGGATCGATGGCCTGAGGCATTGGATGTTTCACAGCATA    850
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    801 TACCAACTCGGCGGATCGATGGCCTGAGGCATTGGATGTTTCACAGCATA    850

BSNT_03004___    851 TTCACAATGCGATGGTAGAGGGGGACTTTCAAGCTTATGTATGGTGGTAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    851 TTCACAATGCGATGGTAGAGGGGGACTTTCAAGCTTATGTATGGTGGTAC    900

BSNT_03004___    901 ATCCGAAGATCATATGGACCTATGAAAGAAGATGGTACGATCAGCAAACG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    901 ATCCGAAGATCATATGGACCTATGAAAGAAGATGGTACGATCAGCAAACG    950

BSNT_03004___    951 CGGCTACAATATGGCTCATTTCTCAAAGTTTGTGCGTCCCGGCTATGTAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy    951 CGGCTACAATATGGCTCATTTCTCAAAGTTTGTGCGTCCCGGCTATGTAA   1000

BSNT_03004___   1001 GGATTGATGCAACGAAAAACCCTAATGCGAACGTTTACGTGTCAGCCTAT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy   1001 GGATTGATGCAACGAAAAACCCTAATGCGAACGTTTACGTGTCAGCCTAT   1050

BSNT_03004___   1051 AAAGGTGACAACAAGGTCGTTATTGTTGCCATCAATAAAAGCAACACAGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy   1051 AAAGGTGACAACAAGGTCGTTATTGTTGCCATCAATAAAAGCAACACAGG   1100

BSNT_03004___   1101 AGTCAACCAAAACTTTGTTTTGCAGAATGGATCTGCTTCAAACGTATCTA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy   1101 AGTCAACCAAAACTTTGTTTTGCAGAATGGATCTGCTTCAAACGTATCTA   1150

BSNT_03004___   1151 GATGGATCACGAGCAGCAGCAGCAATCTACAACCTGGAACGAATCTCACT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18150___xy   1151 GATGGATCACGAGCAGCAGCAGCAATCTACAACCTGGAACGAATCTCACT   1200

BSNT_03004___   1201 GTATCAGGCAATCATTTTTGGGCCCATCTTCCAGCTCAAAGCGTAACAAC   1250
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
BSU18150___xy   1201 GTATCAGGCAATCATTTTTGGGCTCATCTTCCAGCTCAAAGCGTGACAAC   1250

BSNT_03004___   1251 ATTTGTTGTAAATCGTTAA   1269
                     |||||||||||||||||||
BSU18150___xy   1251 ATTTGTTGTAAATCGTTAA   1269


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