Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02989 and BSU18070

See Amino acid alignment / Visit BSNT_02989 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence dna-align/BSNT_02989___yneS.1.22522.seq
#    -bsequence dna-align/BSU18070___yneS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02989___yneS-BSU18070___yneS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02989___yneS-BSU18070___yneS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02989___yneS
# 2: BSU18070___yneS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     580/582 (99.7%)
# Similarity:   580/582 (99.7%)
# Gaps:           0/582 ( 0.0%)
# Score: 2892.0
# 
#
#=======================================

BSNT_02989___      1 ATGTTAATTGCTTTATTGATTATTTTGGCCTACTTGATAGGCAGCATTCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn      1 ATGTTAATTGCTTTATTGATTATTTTGGCCTACTTGATAGGCAGCATTCC     50

BSNT_02989___     51 GTCTGGCTTAATTGTGGGCAAGCTTGCCAAGGGAATTGATATTCGGGAGC    100
                     .|||||||||||||||||||||||||||||.|||||||||||||||||||
BSU18070___yn     51 ATCTGGCTTAATTGTGGGCAAGCTTGCCAAAGGAATTGATATTCGGGAGC    100

BSNT_02989___    101 ACGGAAGCGGCAACTTAGGCGCTACCAATGCATTCCGTACATTGGGTGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    101 ACGGAAGCGGCAACTTAGGCGCTACCAATGCATTCCGTACATTGGGTGTA    150

BSNT_02989___    151 AAAGCTGGTTCGGTCGTCATAGCCGGAGATATTTTGAAAGGGACACTGGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    151 AAAGCTGGTTCGGTCGTCATAGCCGGAGATATTTTGAAAGGGACACTGGC    200

BSNT_02989___    201 AACTGCATTGCCTTTTCTCATGCATGTTGATATTCACCCGCTTCTTGCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    201 AACTGCATTGCCTTTTCTCATGCATGTTGATATTCACCCGCTTCTTGCAG    250

BSNT_02989___    251 GAGTCTTTGCGGTTTTAGGCCACGTGTTTCCCATCTTCGCCAAATTTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    251 GAGTCTTTGCGGTTTTAGGCCACGTGTTTCCCATCTTCGCCAAATTTAAA    300

BSNT_02989___    301 GGCGGTAAAGCCGTGGCGACATCAGGAGGCGTTTTGCTATTTTACGCACC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    301 GGCGGTAAAGCCGTGGCGACATCAGGAGGCGTTTTGCTATTTTACGCACC    350

BSNT_02989___    351 CCTGTTATTTATCACGATGGTTGCGGTATTCTTCATCTTTTTATACTTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    351 CCTGTTATTTATCACGATGGTTGCGGTATTCTTCATCTTTTTATACTTGA    400

BSNT_02989___    401 CTAAATTTGTTTCTCTCTCATCGATGTTAACAGGGATCTATACTGTTATA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    401 CTAAATTTGTTTCTCTCTCATCGATGTTAACAGGGATCTATACTGTTATA    450

BSNT_02989___    451 TATAGTTTCTTTGTCCATGATACGTATTTATTGATTGTCGTTACCCTGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    451 TATAGTTTCTTTGTCCATGATACGTATTTATTGATTGTCGTTACCCTGCT    500

BSNT_02989___    501 CACTATTTTTGTGATATACAGACACCGAGCGAACATTAAACGAATTATCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18070___yn    501 CACTATTTTTGTGATATACAGACACCGAGCGAACATTAAACGAATTATCA    550

BSNT_02989___    551 ATAAAACAGAACCTAAAGTAAAATGGTTATAA    582
                     ||||||||||||||||||||||||||||||||
BSU18070___yn    551 ATAAAACAGAACCTAAAGTAAAATGGTTATAA    582


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.