Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02978 and BSU18000

See Amino acid alignment / Visit BSNT_02978 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:19
# Commandline: needle
#    -asequence dna-align/BSNT_02978___citB.1.22522.seq
#    -bsequence dna-align/BSU18000___citB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02978___citB-BSU18000___citB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02978___citB-BSU18000___citB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02978___citB
# 2: BSU18000___citB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2730
# Identity:    2702/2730 (99.0%)
# Similarity:  2702/2730 (99.0%)
# Gaps:           0/2730 ( 0.0%)
# Score: 13398.0
# 
#
#=======================================

BSNT_02978___      1 ATGGCAAACGAGCAAAAAACTGCAGCAAAAGACGTTTTCCAAGCGAGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci      1 ATGGCAAACGAGCAAAAAACTGCAGCAAAAGACGTTTTCCAAGCGAGAAA     50

BSNT_02978___     51 AACGTTTACTACAAATGGGAAAACATATCATTACTACTCTTTAAAAGCGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci     51 AACGTTTACTACAAATGGGAAAACATATCATTACTACTCTTTAAAAGCGT    100

BSNT_02978___    101 TAGAAGATTCAGGTATAGGAAAGGTTTCGAAGCTTCCTTATTCCATCAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    101 TAGAAGATTCAGGTATAGGAAAGGTTTCGAAGCTTCCTTATTCCATCAAA    150

BSNT_02978___    151 GTTCTTTTAGAATCAGTATTGCGTCAAGTTGACGGCTTCGTTATCAAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    151 GTTCTTTTAGAATCAGTATTGCGTCAAGTTGACGGCTTCGTTATCAAAAA    200

BSNT_02978___    201 AGAACACGTGGAAAATTTGGCAAAATGGGGAACTGCCGAATTAAAGGATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    201 AGAACACGTGGAAAATTTGGCAAAATGGGGAACTGCCGAATTAAAGGATA    250

BSNT_02978___    251 TCGACGTTCCGTTCAAACCGTCTCGAGTTATTTTACAAGACTTCACAGGG    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU18000___ci    251 TCGACGTTCCGTTCAAACCGTCTCGTGTTATTTTACAAGACTTCACAGGG    300

BSNT_02978___    301 GTTCCGGCAGTAGTAGATCTGGCTTCACTGCGTAAAGCAATGGCAGCTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    301 GTTCCGGCAGTAGTAGATCTGGCTTCACTGCGTAAAGCAATGGCAGCTGT    350

BSNT_02978___    351 CGGCGGAGATCCTGATAAAATCAACCCTGAAATTCCTGTTGATCTCGTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    351 CGGCGGAGATCCTGATAAAATCAACCCTGAAATTCCTGTTGATCTCGTTA    400

BSNT_02978___    401 TCGACCACTCTGTACAGGTAGATAAAGCGGGTACAGAAGATGCATTAGCA    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    401 TCGATCACTCTGTACAGGTAGATAAAGCGGGTACAGAAGATGCATTAGCA    450

BSNT_02978___    451 GTAAATATGGACTTGGAATTCGAAAGAAATGCAGAGCGCTACAAATTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    451 GTAAATATGGACTTGGAATTCGAAAGAAATGCAGAGCGCTACAAATTTTT    500

BSNT_02978___    501 AAGCTGGGCAAAGAAAGCGTTTAATAATTATCAGGCAGTGCCGCCTGCAA    550
                     ||||||||||||||||||||||||.||||||||||||||.||||||||||
BSU18000___ci    501 AAGCTGGGCAAAGAAAGCGTTTAACAATTATCAGGCAGTACCGCCTGCAA    550

BSNT_02978___    551 CAGGTATTGTGCACCAGGTCAACCTTGAGTTCTTGGCAAGTGTTGTCCAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    551 CAGGTATTGTGCACCAGGTCAACCTTGAGTTCTTGGCAAGTGTTGTCCAT    600

BSNT_02978___    601 GCCATTGAAGAAGACGGCGAGCTTGTAACGTATCCTGATACGCTTGTCGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    601 GCCATTGAAGAAGACGGCGAGCTTGTAACGTATCCTGATACGCTTGTCGG    650

BSNT_02978___    651 AACAGACTCACACACAACAATGATTAACGGTATCGGTGTTCTCGGCTGGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    651 AACAGACTCACACACAACAATGATTAACGGTATCGGTGTTCTCGGCTGGG    700

BSNT_02978___    701 GTGTCGGTGGAATTGAAGCTGAAGCGGGAATGCTTGGACAGCCTTCTTAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    701 GTGTCGGTGGAATTGAAGCTGAAGCGGGAATGCTTGGACAGCCTTCTTAC    750

BSNT_02978___    751 TTCCCAGTTCCAGAGGTAATCGGCGCGAAACTTGTCGGCAAGCTTCCAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    751 TTCCCAGTTCCAGAGGTAATCGGCGCGAAACTTGTCGGCAAGCTTCCAAA    800

BSNT_02978___    801 CGGAACAACAGCTACTGACTTGGCGTTAAAAGTAACACAAGTGCTGCGTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    801 CGGAACAACAGCTACTGACTTGGCGTTAAAAGTAACACAAGTGCTGCGTG    850

BSNT_02978___    851 AAAAAGGCGTTGTCGGTAAATTTGTTGAATTCTTCGGACCGGGAATTGCT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    851 AAAAAGGCGTTGTCGGTAAATTTGTTGAATTCTTCGGACCGGGAATTGCT    900

BSNT_02978___    901 GAACTGCCGCTTGCAGATCGCGCAACAATTGCGAATATGGCTCCGGAATA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    901 GAACTGCCGCTTGCAGATCGCGCAACAATTGCGAATATGGCTCCGGAATA    950

BSNT_02978___    951 CGGTGCTACATGCGGATTCTTCCCAGTAGATGAAGAAGCGCTTAACTACC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci    951 CGGTGCTACATGCGGATTCTTCCCAGTAGATGAAGAAGCGCTTAACTACC   1000

BSNT_02978___   1001 TGCGCCTGACTGGCCGTGATCCTGAACATATTGATGTTGTTGAAGCATAC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1001 TGCGCCTGACTGGCCGTGATCCTGAACATATTGATGTTGTTGAAGCATAC   1050

BSNT_02978___   1051 TGCAGAAGCAATGGCTTGTTCTACACTCCAGATGCGGAAGACCCTCAATT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1051 TGCAGAAGCAATGGCTTGTTCTACACTCCAGATGCGGAAGACCCTCAATT   1100

BSNT_02978___   1101 TACTGATGTGGTTGAAATTGACCTGTCTCAAATTGAAGCAAACTTATCGG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1101 TACTGATGTGGTTGAAATTGACCTGTCTCAAATTGAAGCAAACTTATCGG   1150

BSNT_02978___   1151 GTCCAAAGCGTCCTCAGGATTTGATCCCGCTATCTGCTATGCAGGAAACG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1151 GTCCAAAGCGTCCTCAGGATTTGATCCCGCTATCTGCTATGCAGGAAACG   1200

BSNT_02978___   1201 TTTAAAAAGCAATTAGTCAGCCCTGCAGGTAACCAAGGATTCGGTTTAAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1201 TTTAAAAAGCAATTAGTCAGCCCTGCAGGTAACCAAGGATTCGGTTTAAA   1250

BSNT_02978___   1251 TGCTGAGGAAGAAAATAAAGAAATTAAGTTTAAACTCCTTAACGGCGAAG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1251 TGCTGAGGAAGAAAATAAAGAAATTAAGTTTAAACTCCTTAACGGCGAAG   1300

BSNT_02978___   1301 AAACAGTTATGAAAACGGGTGCGATCGCCATTGCTGCGATTACAAGCTGT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1301 AAACAGTTATGAAAACGGGTGCGATCGCCATTGCTGCGATTACAAGCTGT   1350

BSNT_02978___   1351 ACAAATACATCAAACCCATACGTTCTGATCGGCGCCGGACTGGTAGCGAA   1400
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU18000___ci   1351 ACAAATACATCAAACCCATACGTGCTGATCGGCGCCGGACTGGTAGCGAA   1400

BSNT_02978___   1401 AAAAGCGGTTGAGTTAGGGCTTAAGGTGCCTAATTACGTGAAAACGTCAC   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1401 AAAAGCGGTTGAGTTAGGGCTTAAGGTGCCTAATTACGTGAAAACGTCAC   1450

BSNT_02978___   1451 TTGCACCGGGTTCTAAAGTTGTTACAGGATATCTTGTGAATTCAGGCCTT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1451 TTGCACCGGGTTCTAAAGTTGTTACAGGATATCTTGTGAATTCAGGCCTT   1500

BSNT_02978___   1501 CTTCCATACATGAAAGAGCTTGGCTTTAACCTCGTTGGCTACGGTTGTAC   1550
                     ||||||||||||||||||||||||||||||||||||||.|||||.|||||
BSU18000___ci   1501 CTTCCATACATGAAAGAGCTTGGCTTTAACCTCGTTGGGTACGGCTGTAC   1550

BSNT_02978___   1551 AACATGTATCGGGAACTCAGGTCCGCTTTCACCGGAAATCGAAGAAGCGG   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1551 AACATGTATCGGGAACTCAGGTCCGCTTTCACCGGAAATCGAAGAAGCGG   1600

BSNT_02978___   1601 TTGCGAAAAATGATCTTCTGATTACGTCTGTCCTTTCCGGAAACCGTAAC   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1601 TTGCGAAAAATGATCTTCTGATTACGTCTGTCCTTTCCGGAAACCGTAAC   1650

BSNT_02978___   1651 TTTGAAGGACGTATTCACCCGCTTGTTAAAGGCAACTATCTTGCTTCACC   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1651 TTTGAAGGACGTATTCACCCGCTTGTTAAAGGCAACTATCTTGCTTCACC   1700

BSNT_02978___   1701 GCCGCTTGTTGTGGCATATGCGCTGGCTGGAACGGTAAACATTAACTTGA   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU18000___ci   1701 GCCGCTTGTTGTGGCATATGCGCTGGCTGGAACGGTAAACATTAACTTAA   1750

BSNT_02978___   1751 AAACCGATCCAATCGGTGTGGGCAAGGATGGTCAAAACGTATACTTTAAT   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1751 AAACCGATCCAATCGGTGTGGGCAAGGATGGTCAAAACGTATACTTTAAT   1800

BSNT_02978___   1801 GATATTTGGCCGTCAATGGACGAAATCAATGCACTTGTTAAGCAAACTGT   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1801 GATATTTGGCCGTCAATGGACGAAATCAATGCACTTGTTAAGCAAACTGT   1850

BSNT_02978___   1851 TACGCCAGAGCTATTCCGCAAAGAGTATGAAACAGTATTTGATGACAACA   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   1851 TACGCCAGAGCTATTCCGCAAAGAGTATGAAACAGTATTTGATGACAACA   1900

BSNT_02978___   1901 AGCGCTGGAACGAAATTGAAACAACAGATGAAGCATTATATAAATGGGAT   1950
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU18000___ci   1901 AGCGCTGGAACGAAATTGAAACAACAGATGAAGCTTTATATAAATGGGAT   1950

BSNT_02978___   1951 AGCGAGTCAACTTACATTCAAAATCCGCCATTCTTCGAAGAAATGTCTGT   2000
                     |.|||.|||||||||||.|||||.||.||||||||.|||||.||||||||
BSU18000___ci   1951 AACGATTCAACTTACATCCAAAACCCACCATTCTTTGAAGAGATGTCTGT   2000

BSNT_02978___   2001 TGAGCCAGGCAAGGTTGAACCATTAAAAGGTTTGCGTGTTGTCGGTAAAT   2050
                     ||||||||||||||||||.|||||||||||..||||||||||||||||||
BSU18000___ci   2001 TGAGCCAGGCAAGGTTGAGCCATTAAAAGGACTGCGTGTTGTCGGTAAAT   2050

BSNT_02978___   2051 TCGGCGATTCAGTCACAACTGACCATATTTCTCCTGCGGGGGCAATCGGA   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2051 TCGGCGATTCAGTCACAACTGACCATATTTCTCCTGCGGGGGCAATCGGA   2100

BSNT_02978___   2101 AAAGATACGCCTGCCGGAAAGTATTTGCAAGAAAAAGGTGTTTCTCCTCG   2150
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU18000___ci   2101 AAAGATACGCCTGCCGGAAAGTATTTGCAAGAAAAAGGTGTTTCACCTCG   2150

BSNT_02978___   2151 TGACTTTAACTCCTACGGTTCCCGCCGCGGAAACCATGAAGTCATGATGA   2200
                     ||||||||||||||||||.||||||||.||||||||||||||||||||||
BSU18000___ci   2151 TGACTTTAACTCCTACGGCTCCCGCCGTGGAAACCATGAAGTCATGATGA   2200

BSNT_02978___   2201 GAGGAACATTTGCAAACATTCGCATCAAAAACCAAATTGCACCGGGTACA   2250
                     |||||||||||||.|||||||||||||||||||||||.||||||||||||
BSU18000___ci   2201 GAGGAACATTTGCCAACATTCGCATCAAAAACCAAATCGCACCGGGTACA   2250

BSNT_02978___   2251 GAAGGCGGATTTACAACGTACTGGCCGACTGGTGAAGTAACATCCATCTA   2300
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU18000___ci   2251 GAAGGCGGATTTACGACGTACTGGCCGACTGGTGAAGTAACATCCATCTA   2300

BSNT_02978___   2301 TGATGCGTGCATGAAATACAAAGAAGATAAAACTGGTCTTGTCGTATTAG   2350
                     ||||||.||||||||||||||||||||||||||.||||||||||||||||
BSU18000___ci   2301 TGATGCATGCATGAAATACAAAGAAGATAAAACCGGTCTTGTCGTATTAG   2350

BSNT_02978___   2351 CAGGAAAAGACTATGGTATGGGATCTTCACGTGACTGGGCTGCAAAAGGA   2400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2351 CAGGAAAAGACTATGGTATGGGATCTTCACGTGACTGGGCTGCAAAAGGA   2400

BSNT_02978___   2401 ACAAACCTTCTCGGCATCAGAACGGTCATTGCAGAGAGCTTCGAAAGAAT   2450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2401 ACAAACCTTCTCGGCATCAGAACGGTCATTGCAGAGAGCTTCGAAAGAAT   2450

BSNT_02978___   2451 TCACAGAAGCAATCTTGTATTCATGGGTGTGCTGCCGCTTCAGTTTAAAC   2500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2451 TCACAGAAGCAATCTTGTATTCATGGGTGTGCTGCCGCTTCAGTTTAAAC   2500

BSNT_02978___   2501 AAGGTGAAAATGCGGATACACTCGGCTTAACGGGTAAAGAAGTCATTGAG   2550
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU18000___ci   2501 AAGGTGAAAATGCGGATACACTCGGCTTAACGGGTAAAGAAGTCATCGAG   2550

BSNT_02978___   2551 GTAGATGTTGATGAAACAGTTCGTCCTCGTGACCTTGTGACTGTAAGAGC   2600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2551 GTAGATGTTGATGAAACAGTTCGTCCTCGTGACCTTGTGACTGTAAGAGC   2600

BSNT_02978___   2601 AATCAATGAAGACGGCAATGTAACAACTTTTGAAGCAGTCGTCCGCTTTG   2650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2601 AATCAATGAAGACGGCAATGTAACAACTTTTGAAGCAGTCGTCCGCTTTG   2650

BSNT_02978___   2651 ATAGTGAAGTTGAAATTGATTACTACCGCCATGGCGGCATCCTTCAAATG   2700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18000___ci   2651 ATAGTGAAGTTGAAATTGATTACTACCGCCATGGCGGCATCCTTCAAATG   2700

BSNT_02978___   2701 GTGCTTCGTGAAAAAATGAAGCAGTCCTGA   2730
                     ||||||||||||||||||||||||||||||
BSU18000___ci   2701 GTGCTTCGTGAAAAAATGAAGCAGTCCTGA   2730


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