Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02970 and BSU17960

See Amino acid alignment / Visit BSNT_02970 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence dna-align/BSNT_02970___yneK.1.22522.seq
#    -bsequence dna-align/BSU17960___yneK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02970___yneK-BSU17960___yneK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02970___yneK-BSU17960___yneK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02970___yneK
# 2: BSU17960___yneK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity:     428/429 (99.8%)
# Similarity:   428/429 (99.8%)
# Gaps:           0/429 ( 0.0%)
# Score: 2136.0
# 
#
#=======================================

BSNT_02970___      1 ATGCTGGAAGGATGGTTTTTATGGTTTATTCTGTTTTGGGTGATCATGAT     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU17960___yn      1 ATGCTGGAAGGATGGTTTTTATGGTTTATTCTGTTTTGGGTAATCATGAT     50

BSNT_02970___     51 GGTAGTCTTATTATCAATCGGCGGTTTTTTCATGTTTCGAAAGTTTTTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn     51 GGTAGTCTTATTATCAATCGGCGGTTTTTTCATGTTTCGAAAGTTTTTAA    100

BSNT_02970___    101 AGCGTTTACCAAAAGAGGACGGCAGATCAGAGCTTGATTGGCAGGATTAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    101 AGCGTTTACCAAAAGAGGACGGCAGATCAGAGCTTGATTGGCAGGATTAC    150

BSNT_02970___    151 TATATTGAAAACAGCAGACATTTATGGAACGATGAAAACAAACAGTTTCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    151 TATATTGAAAACAGCAGACATTTATGGAACGATGAAAACAAACAGTTTCT    200

BSNT_02970___    201 AGATGAATTGACTGCGCCCGTGCCAGAGCTGTTCAGAGATGCAGCAAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    201 AGATGAATTGACTGCGCCCGTGCCAGAGCTGTTCAGAGATGCAGCAAAAG    250

BSNT_02970___    251 CTAAAATCGCAGGCAAAATCGGTGAGCTTGCATTAAAAGAAAAGGTAGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    251 CTAAAATCGCAGGCAAAATCGGTGAGCTTGCATTAAAAGAAAAGGTAGCA    300

BSNT_02970___    301 AAGATTGATCAGCAACTTATGATCAAAGGCTATATTCTCGCAACTCCTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    301 AAGATTGATCAGCAACTTATGATCAAAGGCTATATTCTCGCAACTCCTAA    350

BSNT_02970___    351 AAGAGACCATACCTTCTTAAAAAGGCATCTGCGGGACAAAAAAATCGATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17960___yn    351 AAGAGACCATACCTTCTTAAAAAGGCATCTGCGGGACAAAAAAATCGATT    400

BSNT_02970___    401 TGGAACCTTATCAGACCCTTCTCAAATAA    429
                     |||||||||||||||||||||||||||||
BSU17960___yn    401 TGGAACCTTATCAGACCCTTCTCAAATAA    429


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.