Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02969 and BSU17950

See Amino acid alignment / Visit BSNT_02969 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence dna-align/BSNT_02969___yneJ.1.22522.seq
#    -bsequence dna-align/BSU17950___yneJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02969___yneJ-BSU17950___yneJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02969___yneJ-BSU17950___yneJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02969___yneJ
# 2: BSU17950___yneJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity:     482/492 (98.0%)
# Similarity:   482/492 (98.0%)
# Gaps:           9/492 ( 1.8%)
# Score: 2406.0
# 
#
#=======================================

BSNT_02969___      1 ---------ATGATGATTATAGTTTCATCGATTATTGCTGTGTTAATGGC     41
                              ||||||||||||||||||||.||||||||||||||||||||
BSU17950___yn      1 ATGATAAGTATGATGATTATAGTTTCATCAATTATTGCTGTGTTAATGGC     50

BSNT_02969___     42 TGTAGCTGTGATGGTGGTCAGAATAAAGTCCTCTGACAAGCCTGTTTCAC     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn     51 TGTAGCTGTGATGGTGGTCAGAATAAAGTCCTCTGACAAGCCTGTTTCAC    100

BSNT_02969___     92 CAAAAAAAATCATTCTTCCGCCGATTTTTATGAGTACGGGAGCGTTAATG    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    101 CAAAAAAAATCATTCTTCCGCCGATTTTTATGAGTACGGGAGCGTTAATG    150

BSNT_02969___    142 TTTTTATTTCCGGTATTTTGGGTAACTGGAGCAGAGTTTTTGGAAGCATT    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    151 TTTTTATTTCCGGTATTTTGGGTAACTGGAGCAGAGTTTTTGGAAGCATT    200

BSNT_02969___    192 CACTTTAGGTGTGATTTTCTCTATTTTTCTAATCAAAACTTCTAAGTTCG    241
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    201 CACTTTAGGTGTGATTTTCTCTATTTTTCTAATCAAAACTTCTAAGTTCG    250

BSNT_02969___    242 AAATTAAAAATAATGAAATTTACATGAAACGCTCTAAAGCATTTGTTTTT    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    251 AAATTAAAAATAATGAAATTTACATGAAACGCTCTAAAGCATTTGTTTTT    300

BSNT_02969___    292 ATATTAGTCGGTCTTTTGGTGATCAGAATCGTGATGAAATCGATCTTGAG    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    301 ATATTAGTCGGTCTTTTGGTGATCAGAATCGTGATGAAATCGATCTTGAG    350

BSNT_02969___    342 CACATCAATTGATTATGGTGCACTGAGCGGAATGTTTTGGATTCTGGCTT    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    351 CACATCAATTGATTATGGTGCACTGAGCGGAATGTTTTGGATTCTGGCTT    400

BSNT_02969___    392 TCGGTATGATTGTGCCTTGGAGAATCGCCATGTATTTATCATATCGAAAA    441
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    401 TCGGTATGATTGTGCCTTGGAGAATCGCCATGTATTTATCATATCGAAAA    450

BSNT_02969___    442 CTTCATAACGAGCTGCAGTCATCTAATATTCAAATGAATTAA    483
                     ||||||||||||||||||||||||||||||||||||||||||
BSU17950___yn    451 CTTCATAACGAGCTGCAGTCATCTAATATTCAAATGAATTAA    492


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