Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02946 and BSU17790

See Amino acid alignment / Visit BSNT_02946 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence dna-align/BSNT_02946___yndH.1.22522.seq
#    -bsequence dna-align/BSU17790___yndH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02946___yndH-BSU17790___yndH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02946___yndH-BSU17790___yndH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02946___yndH
# 2: BSU17790___yndH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 633
# Identity:     607/633 (95.9%)
# Similarity:   607/633 (95.9%)
# Gaps:          15/633 ( 2.4%)
# Score: 2991.0
# 
#
#=======================================

BSNT_02946___      1 GTGAGTTCGATTTATGAAAAATCAATTATTAACTATCATTTGCTGCATCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn      1 GTGAGTTCGATTTATGAAAAATCAATTATTAACTATCATTTGCTGCATCC     50

BSNT_02946___     51 CAAGCTGCGGAAACGGTACCAATTAGACGGGTCTCAAACATTCAGCGGGA    100
                     ||||||||.|||||||||||||||||||||||||||.|||||||||||||
BSU17790___yn     51 CAAGCTGCAGAAACGGTACCAATTAGACGGGTCTCATACATTCAGCGGGA    100

BSNT_02946___    101 CGGGAACGATGTCAGAAATAAGCGGAGGCTCTTTTCTGGTTAGAATGCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    101 CGGGAACGATGTCAGAAATAAGCGGAGGCTCTTTTCTGGTTAGAATGCTG    150

BSNT_02946___    151 TTAAAGCTGGGTGTTTTTTTCAGATGCTTCTTTTCAGAAAGAGGCAAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    151 TTAAAGCTGGGTGTTTTTTTCAGATGCTTCTTTTCAGAAAGAGGCAAAGA    200

BSNT_02946___    201 CATTCCATTTACAATACAAAATAGAACTTGTCTTTTGAAATCACAACATA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17790___yn    201 CATTCCATTTACAATACAAAATAGAACTTGTCTTTTGAAATCGCAACATA    250

BSNT_02946___    251 CAGGAATAGAATGGAATCGTACATTTATCTTTAAAGGCAAAAAACGTTTC    300
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU17790___yn    251 CAGGAATAGAATGGAATCGTACATTTTTCTTTAAAGGCAAAAAACGTTTC    300

BSNT_02946___    301 TTTGACGCGATAATGATATATGACGAGAAAGAAAATAGAATACTTGATTT    350
                     |||||.|||.||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    301 TTTGATGCGTTAATGATATATGACGAGAAAGAAAATAGAATACTTGATTT    350

BSNT_02946___    351 CTTCGGCAAACCTCATCTGCTGCTGTCTGTTTTGACGTTCGAGGCATCTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    351 CTTCGGCAAACCTCATCTGCTGCTGTCTGTTTTGACGTTCGAGGCATCTC    400

BSNT_02946___    401 ATGACGGCTCTCTTACGATCACATCGGGAAAGCAATGGCTATTGATATGC    450
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    401 TTGACGGCTCTCTTACGATCACATCGGGAAAGCAATGGCTATTGATATGC    450

BSNT_02946___    451 GGAAAAAGAATCCCGTTGCCGAAATGGCTGACCGGTACATCCGTAGTTTG    500
                     |||||||||||||||.|||||||||||||||||||||||||||.||||||
BSU17790___yn    451 GGAAAAAGAATCCCGCTGCCGAAATGGCTGACCGGTACATCCGAAGTTTG    500

BSNT_02946___    501 CGAAACGTTTGATGAAAAAAAGAATTGTTTCACCATTGAAGTGCATGTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn    501 CGAAACGTTTGATGAAAAAAAGAATTGTTTCACCATTGAAGTGCATGTGC    550

BSNT_02946___    551 AAAATACAATTCTTGGCACTCTTTTCTTTTATAAAGGAACGTTTCAGGAG    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU17790___yn    551 AAAATACAATTCTTGGCACTCTTTTCTTTTATAAGGGAACGTTTCAGGAG    600

BSNT_02946___    601 GAAGAGAGAGAATCATGCAACGAAATGGCATAG    633
                     |||||||||||||||||.               
BSU17790___yn    601 GAAGAGAGAGAATCATGA---------------    618


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