Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02943 and BSU17780

See Amino acid alignment / Visit BSNT_02943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence dna-align/BSNT_02943___yndG.1.22522.seq
#    -bsequence dna-align/BSU17780___yndG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02943___yndG-BSU17780___yndG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02943___yndG-BSU17780___yndG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02943___yndG
# 2: BSU17780___yndG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 807
# Identity:     800/807 (99.1%)
# Similarity:   800/807 (99.1%)
# Gaps:           0/807 ( 0.0%)
# Score: 3972.0
# 
#
#=======================================

BSNT_02943___      1 GTGAGGCAGAAACCGATTTATGTAGAAATCGAAATGAAATCTGATCTGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn      1 GTGAGGCAGAAACCGATTTATGTAGAAATCGAAATGAAATCTGATCTGGA     50

BSNT_02943___     51 TACACTCTGGGAATATACACAAAACCCATCACTGCATAAGGAATGGGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn     51 TACACTCTGGGAATATACACAAAACCCATCACTGCATAAGGAATGGGATC    100

BSNT_02943___    101 TCCGGTTTTCAAATATTACGTATTTGAATAGTCAGCCATGCGAAAAACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    101 TCCGGTTTTCAAATATTACGTATTTGAATAGTCAGCCATGCGAAAAACAG    150

BSNT_02943___    151 AAGTTTCTTTACGAAACAAGGGTAGGCTTTGGATTAAAGGTGTCAGGTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    151 AAGTTTCTTTACGAAACAAGGGTAGGCTTTGGATTAAAGGTGTCAGGTAC    200

BSNT_02943___    201 AGGAGAAACCGTCCGTGTTTTCAACAAATGTTCATCTGAAAGGTCTTCTT    250
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU17780___yn    201 AGGAGAAACCGTCGGTGTTTTCAACAAATGTTCATCTGAAAGGTCTTCTT    250

BSNT_02943___    251 CACTGGCTTTTGGCTCTGATCATCCATTATCTCTGATTCGGCATGGAAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    251 CACTGGCTTTTGGCTCTGATCATCCATTATCTCTGATTCGGCATGGAAGC    300

BSNT_02943___    301 GGCTACTGGAAGTATATACAGAGAGAAAATGGGAAAATGACGTTTTTAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    301 GGCTACTGGAAGTATATACAGAGAGAAAATGGGAAAATGACGTTTTTAAC    350

BSNT_02943___    351 ACAGTACCAATACAAAACAGCCTACGGACTGCTGGGAAGATGGATTGATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    351 ACAGTACCAATACAAAACAGCCTACGGACTGCTGGGAAGATGGATTGATC    400

BSNT_02943___    401 GTTTATTATTTCGGCCGCTGCTTGGCTGGGCGACTGCCTGGAGCTTTGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    401 GTTTATTATTTCGGCCGCTGCTTGGCTGGGCGACTGCCTGGAGCTTTGAT    450

BSNT_02943___    451 GCATTAAGGCTTTGGGTAGAGCAAAATAAACATCCGAAGCGCTTCATTCG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    451 GCATTAAGGCTTTGGGTAGAGCAAAATAAACATCCGAAGCGCTTCATTCG    500

BSNT_02943___    501 ATCTGCTATCATCTATGTGTTCATGTGTCTGTTTTTCAGCCTGTTTTGGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    501 ATCTGCTATCATCTATGTGTTCATGTGTCTGTTTTTCAGCCTGTTTTGGT    550

BSNT_02943___    551 TCTATCAAGGCTTTGCAGGTGTTGAAACAAGCATTTTGGCAGGAACAGCG    600
                     |||||||||||||||||||||||.|.||||||||.|||.|||||||||||
BSU17780___yn    551 TCTATCAAGGCTTTGCAGGTGTTAAGACAAGCATATTGACAGGAACAGCG    600

BSNT_02943___    601 GAGATAGGCTTAGCTATTTTGTGGCTGCTTCCTTTAAAAAGAAAATGGAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    601 GAGATAGGCTTAGCTATTTTGTGGCTGCTTCCTTTAAAAAGAAAATGGAT    650

BSNT_02943___    651 CATTCATGGTGTCCAGGCTTGTATTTTTGCTGGGTTTGCTTGTCTAGGTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    651 CATTCATGGTGTCCAGGCTTGTATTTTTGCTGGGTTTGCTTGTCTAGGTT    700

BSNT_02943___    701 CCGAAATATTCATGTGGATTCTGTTGAGTGTGTTTTCCGCTGCAAGCGGC    750
                     |||||||||||||||||.||||.|||||||||||||||||||||||||||
BSU17780___yn    701 CCGAAATATTCATGTGGGTTCTATTGAGTGTGTTTTCCGCTGCAAGCGGC    750

BSNT_02943___    751 GCTCTTAGCCTGCAGCTCCCCAGTGCCAGGCGCACAAAACGAAAGAGAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17780___yn    751 GCTCTTAGCCTGCAGCTCCCCAGTGCCAGGCGCACAAAACGAAAGAGAAA    800

BSNT_02943___    801 GAAGTGA    807
                     |||||||
BSU17780___yn    801 GAAGTGA    807


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