Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02911 and BSU17640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:14
# Commandline: needle
# -asequence dna-align/BSNT_02911___yncD.1.22522.seq
# -bsequence dna-align/BSU17640___alrB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02911___yncD-BSU17640___alrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02911___yncD-BSU17640___alrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02911___yncD
# 2: BSU17640___alrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1188
# Identity: 1173/1188 (98.7%)
# Similarity: 1173/1188 (98.7%)
# Gaps: 3/1188 ( 0.3%)
# Score: 5817.0
#
#
#=======================================
BSNT_02911___ 1 TTGATGATAAAGCTTTGCCGAGAAGTTTGGATCGAAGTCAATCTTGATGC 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 1 ---ATGATAAAGCTTTGCCGAGAAGTTTGGATCGAAGTCAATCTTGATGC 47
BSNT_02911___ 51 CGTTAAAAAGAATTTGCGAGCGATCCGCCGTCATATTCCACATAAGAGCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 48 CGTTAAAAAGAATTTGCGAGCGATCCGCCGTCATATTCCACATAAGAGCA 97
BSNT_02911___ 101 AAATTATGGCTGTCGTAAAAGCGAACGGTTATGGTCACGGGTCTATAGAA 150
|||||||||||||.||||||||||||||||||||.|||||||||||||||
BSU17640___al 98 AAATTATGGCTGTTGTAAAAGCGAACGGTTATGGCCACGGGTCTATAGAA 147
BSNT_02911___ 151 GTGGCACGCCATGCACTGGAACACGGGGCGAGTGAGCTTGCTGTTGCCAG 200
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU17640___al 148 GTGGCACGCCATGCACTGGAACACGGGGCGAGTGAGCTCGCTGTTGCCAG 197
BSNT_02911___ 201 TGTGGAGGAAGGAATCGTTTTACGTAAAGCTGGGATTACAGCACCTATCC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 198 TGTGGAGGAAGGAATCGTTTTACGTAAAGCTGGGATTACAGCACCTATCC 247
BSNT_02911___ 251 TTGTGCTTGGTTTTACATCCCTTAGTTGTGTAAAGAAGTCAGCAGCTTGG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 248 TTGTGCTTGGTTTTACATCCCTTAGTTGTGTAAAGAAGTCAGCAGCTTGG 297
BSNT_02911___ 301 AATATAACATTATCAGCATTCCAGGTTGATTGGATGAAAGAAGCAAACGA 350
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU17640___al 298 AATATAACATTATCAGCATTTCAGGTTGATTGGATGAAAGAAGCAAACGA 347
BSNT_02911___ 351 GATATTGGAAAAAGAAGCGAGTGCTAACCGGCTGGCCATTCATATTAACG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 348 GATATTGGAAAAAGAAGCGAGTGCTAACCGGCTGGCCATTCATATTAACG 397
BSNT_02911___ 401 TGGATACCGGCATGGGACGATTAGGTGTACGCACAAAGGAAGAACTTTTA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 398 TGGATACCGGCATGGGACGATTAGGTGTACGCACAAAGGAAGAACTTTTA 447
BSNT_02911___ 451 GAAGTAGTGAAAGCCTTAAAGGCAAGTAAATTCCTCAGATGGACAGGGAT 500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 448 GAGGTAGTGAAAGCCTTAAAGGCAAGTAAATTCCTCAGATGGACAGGGAT 497
BSNT_02911___ 501 TTTCACACATTTTTCGACAGCTGATGAACCGGACACAACACTCACAAAGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 498 TTTCACACATTTTTCGACAGCTGATGAACCGGACACAACACTCACAAAGC 547
BSNT_02911___ 551 TGCAGCACGAAAAATTCATCAGTTTTCTCAGCTTTTTAAAAAAACAGGGG 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 548 TGCAGCATGAAAAATTCATCAGTTTTCTCAGCTTTTTAAAAAAACAGGGG 597
BSNT_02911___ 601 ATTGAGCTGCCCACCGTGCATATGTGCAACACGGCTGCAGCTATCGCTTT 650
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU17640___al 598 ATTGAGCTGCCCACCGTGCATATGTGCAACACGGCTGCAGCTATCGCATT 647
BSNT_02911___ 651 TCCGGAATTTAGCGCTGATATGATCCGTTTAGGTATCGGCTTATATGGTT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 648 TCCGGAATTTAGCGCTGATATGATCCGTTTAGGTATCGGCTTATATGGTT 697
BSNT_02911___ 701 TATATCCTTCAGCCTATATTAAACAACTAAATCTCGTTAAGCTTGAACCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 698 TATATCCTTCAGCCTATATTAAACAACTAAATCTCGTTAAGCTTGAACCT 747
BSNT_02911___ 751 GCGTTAAGTTTAAAGGCGCGCATCGCTTATGTGAAAACCATGCGGACAGA 800
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU17640___al 748 GCGTTAAGTTTAAAGGCACGCATCGCTTATGTGAAAACCATGCGGACAGA 797
BSNT_02911___ 801 ACCCCGAACCGTTAGCTATGGTGCTACATACGTCGCAGAGCCTAATGAAG 850
|||||||||||||||||||||||||||||||.|||||||.||||||||||
BSU17640___al 798 ACCCCGAACCGTTAGCTATGGTGCTACATACATCGCAGAACCTAATGAAG 847
BSNT_02911___ 851 TAATTGCTACACTCCCGATTGGCTATGCTGACGGCTATTCTCGTGCCCTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 848 TAATTGCTACACTCCCGATTGGCTATGCTGACGGCTATTCTCGTGCCCTT 897
BSNT_02911___ 901 TCCAATCGCGGGTTTGTTCTTCATCGCGGAAAACGAGTGCCAGTGGCAGG 950
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU17640___al 898 TCCAATCGCGGGTTTGTTCTTCATCGCGGAAAACGAGTGCCAGTGGCGGG 947
BSNT_02911___ 951 AAGAGTAACAATGGATATGATCATGGTCAGTTTAGGAGAAAACGGTGAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 948 AAGAGTAACAATGGATATGATCATGGTCAGTTTAGGAGAAAACGGTGAAG 997
BSNT_02911___ 1001 GTAAACAAGGAGATGAAGTCGTGATTTACGGTAAGCAAAAAGGAGCCGAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 998 GTAAACAAGGAGATGAAGTCGTGATTTACGGTAAGCAAAAAGGAGCCGAG 1047
BSNT_02911___ 1051 ATTTCCGTTGATGAAGTGGCTGAAATGCTCAATACGATTAACTATGAAGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 1048 ATTTCCGTTGATGAAGTGGCTGAAATGCTCAATACGATTAACTATGAAGT 1097
BSNT_02911___ 1101 CGTGTCTACATTAAGCCGCCGCATCCCTCGTTTTTATATAAGAGATGGCG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17640___al 1098 CGTGTCTACATTAAGCCGCCGCATCCCTCGTTTTTATATAAGAGATGGCG 1147
BSNT_02911___ 1151 AGATTTTTAAAGTATCAACTCCAGTATTATACGTATAG 1188
||||||||||||||||||||||||||||||||||.|||
BSU17640___al 1148 AGATTTTTAAAGTATCAACTCCAGTATTATACGTGTAG 1185
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