Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02898 and BSU17570

See Amino acid alignment / Visit BSNT_02898 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence dna-align/BSNT_02898___xynP.1.22522.seq
#    -bsequence dna-align/BSU17570___xynP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02898___xynP-BSU17570___xynP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02898___xynP-BSU17570___xynP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02898___xynP
# 2: BSU17570___xynP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1398
# Identity:    1374/1398 (98.3%)
# Similarity:  1374/1398 (98.3%)
# Gaps:          12/1398 ( 0.9%)
# Score: 6809.5
# 
#
#=======================================

BSNT_02898___      1 ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy      1 ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATA     50

BSNT_02898___     51 TGCGTCTGGAGATTTTGCTTGTAATTTAATTTATGCAACAGTGTCTACGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy     51 TGCGTCTGGAGATTTTGCTTGTAATTTAATTTATGCAACAGTGTCTACGT    100

BSNT_02898___    101 ATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    101 ATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCC    150

BSNT_02898___    151 GGTACTATGTTTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    151 GGTACTATGTTTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTT    200

BSNT_02898___    201 TATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGACGCTTTAGAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    201 TATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGACGCTTTAGAC    250

BSNT_02898___    251 CGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    251 CGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGT    300

BSNT_02898___    301 TTTACAACACCAGACTTTTCGGATATGGGGAAATTAGTATATGCCTATAT    350
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU17570___xy    301 TTTACAACACCAGACTTTTCGGATATGGGGAAATTAATATATGCCTATAT    350

BSNT_02898___    351 AACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    351 AACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG    400

BSNT_02898___    401 GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    401 GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATA    450

BSNT_02898___    451 ACTTCTGTTCGCATGTTATTTGCGAATCTTGGGGGACTTGTCGTTGCATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    451 ACTTCTGTTCGCATGTTATTTGCGAATCTTGGGGGACTTGTCGTTGCATT    500

BSNT_02898___    501 TTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCAACGAGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    501 TTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCAACGAGT    550

BSNT_02898___    551 CTCTTGGCTGGCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGTGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    551 CTCTTGGCTGGCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGTGC    600

BSNT_02898___    601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCACTCTTCAAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCACTCTTCAAAA    650

BSNT_02898___    651 ATCCGAAGAAAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTGTTA    700
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    651 ATCCGAAGAGAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTGTTA    700

BSNT_02898___    701 ATCGTCCACTTGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy    701 ATCGTCCACTTGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG    750

BSNT_02898___    751 AATTCCATCAGTAATTCGGTTGGCATTTATTACGTAACATATAACTTAGA    800
                     |||||||||||||||||||||||||||||.||||||||.|||||||||||
BSU17570___xy    751 AATTCCATCAGTAATTCGGTTGGCATTTACTACGTAACGTATAACTTAGA    800

BSNT_02898___    801 AAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTGCCCGCTT    850
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17570___xy    801 AAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTACCCGCTT    850

BSNT_02898___    851 TGGTCATTTTACCGTTTATTCCAAGGCTTCATCAATTTTTGGGGAAGAAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU17570___xy    851 TGGTCATTTTACCGTTTATTCCAAGGCTTCATCAATTTTTGGGGAAAAAG    900

BSNT_02898___    901 AAATTACTAAACTATGCATTATTACTGAATATTATCGGCCTCTTAGCTTT    950
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU17570___xy    901 AAATTACTAAACTATGCATTATTACTGAATATTATAGGCCTCTTAGCTTT    950

BSNT_02898___    951 ACTGTTTGCTCCGCCAAGTAATGTATACCTCATACTTGTCTGTCGATTAA   1000
                     ||||||||.|||||||||||||||.|||||||||||||||||||||||||
BSU17570___xy    951 ACTGTTTGTTCCGCCAAGTAATGTTTACCTCATACTTGTCTGTCGATTAA   1000

BSNT_02898___   1001 TCGCTGCTGCTGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy   1001 TCGCTGCTGCTGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT   1050

BSNT_02898___   1051 CCTGAAACAATTGAATATGGAGAGTACAGGACTGGGAAAAGAATGGGTGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy   1051 CCTGAAACAATTGAATATGGAGAGTACAGGACTGGGAAAAGAATGGGTGG   1100

BSNT_02898___   1101 GCTCATTTACGCTATCATCGGATTTTTCTTTAAGTTTGGTATGGCCTTAG   1150
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU17570___xy   1101 GCTCATTTACGCTATAATCGGATTTTTCTTTAAGTTTGGTATGGCCTTAG   1150

BSNT_02898___   1151 GAGGAGTTGTTCCGGGTCTGGTTCTTGATAAGTTTGGATATGTAGCAAAT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy   1151 GAGGAGTTGTTCCGGGTCTGGTTCTTGATAAGTTTGGATATGTAGCAAAT   1200

BSNT_02898___   1201 CAGGCACAAACCCCGGCGGCATTAATGGGGATTTTAATTACAACAACGAT   1250
                     ||||||||||||||||||||.||||||||||||||||||||||||||.||
BSU17570___xy   1201 CAGGCACAAACCCCGGCGGCCTTAATGGGGATTTTAATTACAACAACCAT   1250

BSNT_02898___   1251 TATTCCCGTGTTCTTGCTTGTTCTAGCTTTAATTGATATTAATTTCTATA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy   1251 TATTCCCGTGTTCTTGCTTGTTCTAGCTTTAATTGATATTAATTTCTATA   1300

BSNT_02898___   1301 ACTTAGATGAGAAAAAATATAAAAACATGGTTCGAGAATTAGAGAATAGA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17570___xy   1301 ACTTAGATGAGAAAAAATATAAAAACATGGTTCGAGAATTAGAGAATAGA   1350

BSNT_02898___   1351 GACAAAGTTTATTTGGATCATATTGATGATTTCACTATTTAG------   1392
                     ||||||||||||||||||||||||||||||||||      ||      
BSU17570___xy   1351 GACAAAGTTTATTTGGATCATATTGATGATTTCA------AGGCTTAA   1392


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.