Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02897 and BSU17560

See Amino acid alignment / Visit BSNT_02897 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence dna-align/BSNT_02897___ynaI.1.22522.seq
#    -bsequence dna-align/BSU17560___ynaI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02897___ynaI-BSU17560___ynaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02897___ynaI-BSU17560___ynaI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02897___ynaI
# 2: BSU17560___ynaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity:     448/471 (95.1%)
# Similarity:   448/471 (95.1%)
# Gaps:           0/471 ( 0.0%)
# Score: 2148.0
# 
#
#=======================================

BSNT_02897___      1 ATGAAATTGTATAATGAATTTATCAATATAGCTAAAACGTTTAATAAAGA     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU17560___yn      1 ATGAAGTTGTATAATGAATTTATCAATATAGCTAAAACGTTTAATAAAGA     50

BSNT_02897___     51 GTTAGACATAATTCCATTATTATATGGATCTTTAGGTCTTGAAAAGGTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17560___yn     51 GTTAGACATAATTCCATTATTATATGGATCTTTAGGTCTTGAAAAGGTAA    100

BSNT_02897___    101 CTGGGTTAGACTTTTCTCCAGAAGATATTGATCTCCTTATTCCTTTAATT    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU17560___yn    101 CTGGGTTAGACTTTTCCCCAGAAGATATTGATCTCCTTATTCCTTTAATT    150

BSNT_02897___    151 TTTTTAGAGGAAAAGTGGGAAAAACTAAAAAAAGTGATGGAACTGCATGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17560___yn    151 TTTTTAGAGGAAAAGTGGGAAAAACTAAAAAAAGTGATGGAACTGCATGG    200

BSNT_02897___    201 ATACAAAATGGTTGATTTACATGAGCATGAATTTAAGAAAACTAATACTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU17560___yn    201 ATACAAAATGGTTGATTTACATGAGCATGAATTTAAGAAAACTAATACAA    250

BSNT_02897___    251 AAATAGGCATTGCTTACATCGAGGATTTAAAACCATTTGCAGATGTAGAC    300
                     |||||||||||.|||||||.||||||||||||||||||||||||||||||
BSU17560___yn    251 AAATAGGCATTTCTTACATTGAGGATTTAAAACCATTTGCAGATGTAGAC    300

BSNT_02897___    301 TATAATAACTTAGAGGTATTTGAGGATGGTGGAGCGAAATATCATTTGCT    350
                     |||||||||.|||||.|.|||||.|||||.||||||||||||||||||||
BSU17560___yn    301 TATAATAACCTAGAGATTTTTGAAGATGGCGGAGCGAAATATCATTTGCT    350

BSNT_02897___    351 AACGATTGATGATTACCTCAAGGTTTATAAAAAGTCTTTATTAGATGGCT    400
                     ||||||||||||||||||||||.|||||||||||||||||||||||||.|
BSU17560___yn    351 AACGATTGATGATTACCTCAAGATTTATAAAAAGTCTTTATTAGATGGTT    400

BSNT_02897___    401 ATAGAAGAACAAAGAAGAACTATAAAGACCAAAGGAAAATCAATATATTG    450
                     |||||||||..||||||||..|||||||||||||.|||||.||.||||||
BSU17560___yn    401 ATAGAAGAAGGAAGAAGAATCATAAAGACCAAAGTAAAATTAACATATTG    450

BSNT_02897___    451 AATAAACTAATACAGAACTGA    471
                     ||||||.||||||.|||.|.|
BSU17560___yn    451 AATAAATTAATACGGAATTAA    471


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