Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02798 and BSU17420

See Amino acid alignment / Visit BSNT_02798 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:10
# Commandline: needle
#    -asequence dna-align/BSNT_02798___spoVK.1.22522.seq
#    -bsequence dna-align/BSU17420___spoVK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02798___spoVK-BSU17420___spoVK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02798___spoVK-BSU17420___spoVK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02798___spoVK
# 2: BSU17420___spoVK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity:     961/969 (99.2%)
# Similarity:   961/969 (99.2%)
# Gaps:           3/969 ( 0.3%)
# Score: 4785.0
# 
#
#=======================================

BSNT_02798___      1 ---TTGGAGCGCGCTGTGACTTATAAAAACAACGGACAGATCAACATTAT     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp      1 ATGTTGGAGCGCGCTGTGACTTATAAAAACAACGGACAGATCAACATTAT     50

BSNT_02798___     48 TCTGAACGGGCAAAAGCAGGTGCTGACGAATGCTGAGGCAGAAGCGGAAT     97
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17420___sp     51 TCTGAACGGGCAAAAGCAGGTGCTGACGAATGCTGAGGCAGAGGCGGAAT    100

BSNT_02798___     98 ATCAGGCTGCATTGCAAAAAAACGAAGCAAAGCACGGCATTTTGAAGGAA    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    101 ATCAGGCTGCATTGCAAAAAAACGAAGCAAAGCACGGCATTTTGAAGGAA    150

BSNT_02798___    148 ATCGAAAAAGAAATGAGCGCATTAGTTGGGATGGAGGAAATGAAACGCAA    197
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU17420___sp    151 ATCGAAAAAGAGATGAGCGCATTAGTTGGGATGGAGGAAATGAAACGCAA    200

BSNT_02798___    198 CATCAAGGAAATATACGCTTGGATTTTTGTGAACCAAAAACGCGCGGAGC    247
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU17420___sp    201 CATCAAGGAAATATACGCCTGGATTTTTGTGAACCAAAAACGCGCGGAGC    250

BSNT_02798___    248 AAGGCTTGAAGGTTGGAAAGCAAGCGCTGCACATGATGTTTAAAGGAAAT    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    251 AAGGCTTGAAGGTTGGAAAGCAAGCGCTGCACATGATGTTTAAAGGAAAT    300

BSNT_02798___    298 CCGGGAACGGGAAAAACGACGGTTGCACGGCTCATCGGCAAGCTGTTCTT    347
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    301 CCGGGAACGGGAAAAACGACGGTTGCACGGCTCATCGGCAAGCTGTTCTT    350

BSNT_02798___    348 TGAAATGAATGTCCTGTCAAAAGGCCACTTAATAGAAGCGGAGCGGGCTG    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    351 TGAAATGAATGTCCTGTCAAAAGGCCACTTAATAGAAGCGGAGCGGGCTG    400

BSNT_02798___    398 ACCTGGTCGGGGAGTATATCGGACATACCGCCCAAAAGACGAGAGATTTA    447
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU17420___sp    401 ACCTGGTCGGGGAGTATATCGGACACACCGCCCAAAAGACGAGAGATTTA    450

BSNT_02798___    448 ATCAAAAAGTCATTAGGTGGCATTTTGTTTATAGACGAAGCCTACTCGCT    497
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    451 ATCAAAAAGTCATTAGGTGGCATTTTGTTTATAGACGAAGCCTACTCGCT    500

BSNT_02798___    498 GGCAAGAGGCGGCGAAAAGGACTTTGGGAAAGAAGCGATCGACACACTTG    547
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    501 GGCAAGAGGCGGCGAAAAGGACTTTGGGAAAGAAGCGATCGACACACTTG    550

BSNT_02798___    548 TAAAGCATATGGAAGACAAACAGCATGAGTTTATTTTGATACTCGCCGGA    597
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    551 TAAAGCATATGGAAGACAAACAGCATGAGTTTATTTTGATACTCGCCGGA    600

BSNT_02798___    598 TATTCACGGGAAATGGATCATTTTCTCTCGTTAAATCCCGGACTCCAATC    647
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    601 TATTCACGGGAAATGGATCATTTTCTCTCGTTAAATCCCGGACTCCAATC    650

BSNT_02798___    648 AAGATTTCCCATCTCCATTGATTTTCCGGATTACTCTGTGACCCAGCTCA    697
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    651 AAGATTTCCCATCTCCATTGATTTTCCGGATTACTCTGTGACCCAGCTCA    700

BSNT_02798___    698 TGGAGATTGCGAAACGAATGATCGATGAAAGGGAATACCAGCTCAGTCAA    747
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    701 TGGAGATTGCGAAACGAATGATCGATGAAAGGGAATACCAGCTCAGTCAA    750

BSNT_02798___    748 GAAGCTGAATGGAAATTGAAAGATTACTTAATGACAGTGAAAAGCACGAC    797
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    751 GAAGCGGAATGGAAATTGAAAGATTACTTAATGACAGTGAAAAGCACGAC    800

BSNT_02798___    798 AAGTCCCATTAAATTCAGCAATGGACGTTTTGTCAGAAATGTGATCGAAA    847
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    801 AAGTCCCATTAAATTCAGCAATGGACGTTTTGTCAGAAATGTGATCGAAA    850

BSNT_02798___    848 AATCGATCAGAGCACAAGCCATGAGGCTTTTAATGGGAGACCAATACTTA    897
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    851 AATCGATCAGAGCACAAGCCATGAGGCTTTTAATGGGAGACCAATACTTA    900

BSNT_02798___    898 AAAAGCGACTTGATGACCATCAAAAGCCAAGATCTTTCCATTAAAGAAGA    947
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17420___sp    901 AAAAGCGACTTGATGACCATCAAAAGCCAAGATCTTTCCATTAAAGAAGA    950

BSNT_02798___    948 AGCATCTGGATCTGCATAG    966
                     |||||||||||||||||||
BSU17420___sp    951 AGCATCTGGATCTGCATAG    969


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02798 and BSU17420

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
