Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02790 and BSU17350

See Amino acid alignment / Visit BSNT_02790 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:08
# Commandline: needle
#    -asequence dna-align/BSNT_02790___ymzC.1.22522.seq
#    -bsequence dna-align/BSU17350___ymzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02790___ymzC-BSU17350___ymzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02790___ymzC-BSU17350___ymzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02790___ymzC
# 2: BSU17350___ymzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     271/273 (99.3%)
# Similarity:   271/273 (99.3%)
# Gaps:           0/273 ( 0.0%)
# Score: 1347.0
# 
#
#=======================================

BSNT_02790___      1 TTGTTTGAAAGTGAAGCAGAACTGAGACGAATCAGGATTGCACTTGTATG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17350___ym      1 TTGTTTGAAAGTGAAGCAGAACTGAGACGAATCAGGATTGCACTTGTATG     50

BSNT_02790___     51 GATAGCTGTCTTTTTACTGTTCGGGGCGTGCGGGAATCAAGATACCATTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17350___ym     51 GATAGCTGTCTTTTTACTGTTCGGGGCGTGCGGGAATCAAGATACCATTA    100

BSNT_02790___    101 TTGAAACAGACAGCGGCAATTCAGACTATGAAACGCCTCAGCCCACCTCG    150
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU17350___ym    101 TTGAAACAGACAACGGCAATTCAGACTATGAAACGCCTCAGCCCACCTCG    150

BSNT_02790___    151 TTTCCACTTGAACATAACCATTTTGGCGTGATGGAGGACGGCTATATCAA    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU17350___ym    151 TTTCCACTTGAACATAACCATTTTGGCGTTATGGAGGACGGCTATATCAA    200

BSNT_02790___    201 AATTTATGAGTATAATGAGTCCCGCAATGAGGTAAAGCTGAAGAAAGAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17350___ym    201 AATTTATGAGTATAATGAGTCCCGCAATGAGGTAAAGCTGAAGAAAGAAT    250

BSNT_02790___    251 ACGCGGATGATGAGCTTGAATAA    273
                     |||||||||||||||||||||||
BSU17350___ym    251 ACGCGGATGATGAGCTTGAATAA    273


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