Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02785 and BSU17300

See Amino acid alignment / Visit BSNT_02785 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:08
# Commandline: needle
#    -asequence dna-align/BSNT_02785.1.22522.seq
#    -bsequence dna-align/BSU17300___ebrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02785-BSU17300___ebrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02785-BSU17300___ebrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02785
# 2: BSU17300___ebrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     254/318 (79.9%)
# Similarity:   254/318 (79.9%)
# Gaps:          60/318 (18.9%)
# Score: 1254.0
# 
#
#=======================================

BSNT_02785         0 --------------------------------------------------      0
                                                                       
BSU17300___eb      1 ATGTTGATAGGATATATATTCCTCACGATTGCCATATGTTCGGAATCGAT     50

BSNT_02785         1 ----------ATGCTGAAAGTATCTGATGGCTTCAAAAAGTGGAAGCCAA     40
                               ||||||||||||||||||||||||||||||||||||||||
BSU17300___eb     51 AGGAGCAGCCATGCTGAAAGTATCTGATGGCTTCAAAAAGTGGAAGCCAA    100

BSNT_02785        41 GTGCTTTGGTCGTCATTGGCTATTCCCTCGCCTTTTATATGCTGTCCCTG     90
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU17300___eb    101 GTGCTTTGGTCGTTATTGGCTATTCCCTCGCCTTTTATATGCTGTCCCTG    150

BSNT_02785        91 ACTTTAAACCATATTCCCCTCAGCCTCTCCTATGCGACTTGGAGCGGGGC    140
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU17300___eb    151 ACTTTAAACCATATTCCCCTGAGCCTCTCCTATGCGACTTGGAGCGGGGC    200

BSNT_02785       141 GGGCACAGTGCTGACGACAGTGATCGGAGTAAAATGGTTCAAGGAAGATC    190
                     .|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU17300___eb    201 AGGCACGGTGCTGACGACAGTGATCGGAGTAAAATGGTTCAAGGAAGATC    250

BSNT_02785       191 TGAATGCCAAAGGGCTTATCGGGATTCTTTTATTACTATCAGGGGTCGTG    240
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17300___eb    251 TGAATGCCAAAGGGCTTATCGGGATTCTTTTATTACTATCAGGGGTCGTG    300

BSNT_02785       241 TTACTTAATTGGCCGTAA    258
                     ||||||||||||||||||
BSU17300___eb    301 TTACTTAATTGGCCGTAA    318


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