Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02785 and BSU17300
See
Amino acid alignment /
Visit
BSNT_02785 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:08
# Commandline: needle
# -asequence dna-align/BSNT_02785.1.22522.seq
# -bsequence dna-align/BSU17300___ebrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02785-BSU17300___ebrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02785-BSU17300___ebrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02785
# 2: BSU17300___ebrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 254/318 (79.9%)
# Similarity: 254/318 (79.9%)
# Gaps: 60/318 (18.9%)
# Score: 1254.0
#
#
#=======================================
BSNT_02785 0 -------------------------------------------------- 0
BSU17300___eb 1 ATGTTGATAGGATATATATTCCTCACGATTGCCATATGTTCGGAATCGAT 50
BSNT_02785 1 ----------ATGCTGAAAGTATCTGATGGCTTCAAAAAGTGGAAGCCAA 40
||||||||||||||||||||||||||||||||||||||||
BSU17300___eb 51 AGGAGCAGCCATGCTGAAAGTATCTGATGGCTTCAAAAAGTGGAAGCCAA 100
BSNT_02785 41 GTGCTTTGGTCGTCATTGGCTATTCCCTCGCCTTTTATATGCTGTCCCTG 90
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU17300___eb 101 GTGCTTTGGTCGTTATTGGCTATTCCCTCGCCTTTTATATGCTGTCCCTG 150
BSNT_02785 91 ACTTTAAACCATATTCCCCTCAGCCTCTCCTATGCGACTTGGAGCGGGGC 140
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU17300___eb 151 ACTTTAAACCATATTCCCCTGAGCCTCTCCTATGCGACTTGGAGCGGGGC 200
BSNT_02785 141 GGGCACAGTGCTGACGACAGTGATCGGAGTAAAATGGTTCAAGGAAGATC 190
.|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU17300___eb 201 AGGCACGGTGCTGACGACAGTGATCGGAGTAAAATGGTTCAAGGAAGATC 250
BSNT_02785 191 TGAATGCCAAAGGGCTTATCGGGATTCTTTTATTACTATCAGGGGTCGTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17300___eb 251 TGAATGCCAAAGGGCTTATCGGGATTCTTTTATTACTATCAGGGGTCGTG 300
BSNT_02785 241 TTACTTAATTGGCCGTAA 258
||||||||||||||||||
BSU17300___eb 301 TTACTTAATTGGCCGTAA 318
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.