Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02773 and BSU17070

See Amino acid alignment / Visit BSNT_02773 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence dna-align/BSNT_02773___ymcC.1.22522.seq
#    -bsequence dna-align/BSU17070___ymcC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02773___ymcC-BSU17070___ymcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02773___ymcC-BSU17070___ymcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02773___ymcC
# 2: BSU17070___ymcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     549/558 (98.4%)
# Similarity:   549/558 (98.4%)
# Gaps:           0/558 ( 0.0%)
# Score: 2709.0
# 
#
#=======================================

BSNT_02773___      1 TTGAACGGTATCGCATGGATGATTGTTTTCTGTGAAATTGCGTTTTGGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym      1 TTGAACGGTATCGCATGGATGATTGTTTTCTGTGAAATTGCGTTTTGGGT     50

BSNT_02773___     51 TGTCATTGTATTGGGGCTTGCTGTACGTTACGTATTCAAACGACATACAT    100
                     |||||||||.|||||||||||||||||.||||||||||||||||||||||
BSU17070___ym     51 TGTCATTGTTTTGGGGCTTGCTGTACGCTACGTATTCAAACGACATACAT    100

BSNT_02773___    101 TAGGACTGCTATTCCTTGGCTTAACTCCAGTTATCGATTTGATTTTGTTA    150
                     ||||||||||||||||||.||||||||||||||||||||||||.||||||
BSU17070___ym    101 TAGGACTGCTATTCCTTGCCTTAACTCCAGTTATCGATTTGATCTTGTTA    150

BSNT_02773___    151 GCGGCAACTGGTGTGGACCTTTACCGCGGAGCCTCAGCGACCGCAGCCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym    151 GCGGCAACTGGTGTGGACCTTTACCGCGGAGCCTCAGCGACCGCAGCCCA    200

BSNT_02773___    201 TGGGATTGCAGCTGTTTACATCGGTATATCGATCGCTTATGGAAAACAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17070___ym    201 TGGGATTGCAGCTGTTTACATCGGTATATCGATCGCTTATGGGAAACAAA    250

BSNT_02773___    251 TGATTCAATGGGCAGATGAAAAGTTCCAATATTATGTGACAAAAAAAGGC    300
                     |||||||||||||||||||||||||.|||||||||||||||||||||||.
BSU17070___ym    251 TGATTCAATGGGCAGATGAAAAGTTTCAATATTATGTGACAAAAAAAGGA    300

BSNT_02773___    301 GCAAAACCGCTGAAACGTTTTGGAATGGACCATGCCAAGCACGGTGCGAA    350
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym    301 ACAAAACCGCTGAAACGTTTTGGAATGGACCATGCCAAGCACGGTGCGAA    350

BSNT_02773___    351 AGGCTGGCTAAGACATGTGCTGGCCTACTTAATTGGTGCGGGACTATTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym    351 AGGCTGGCTAAGACATGTGCTGGCCTACTTAATTGGTGCGGGACTATTGG    400

BSNT_02773___    401 CAGGGATGATCTATTTTATCAATGACTCTGCCCGAACCGAGGCGTTGAGC    450
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU17070___ym    401 CAGGGATGATCTATTTTATCAATGACTCTTCCCGAACCGAGGCGTTGAGC    450

BSNT_02773___    451 GGCATTCTTAAACTGTGGACTGTCATTATAGGCATTGACTTTCTCATTAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym    451 GGCATTCTTAAACTGTGGACTGTCATTATAGGCATTGACTTTCTCATTAC    500

BSNT_02773___    501 AGCCAGCTATTTTATTTGGCCAAAAAAAGAGAAAGCTTCGGCGAATCTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17070___ym    501 AGCCAGCTATTTTATTTGGCCAAAAAAAGAGAAAGCTTCGGCGAATCTCA    550

BSNT_02773___    551 GGAGTTAA    558
                     ||||||||
BSU17070___ym    551 GGAGTTAA    558


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