Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02753 and BSU17030

See Amino acid alignment / Visit BSNT_02753 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:06
# Commandline: needle
#    -asequence dna-align/BSNT_02753___cotE.1.22522.seq
#    -bsequence dna-align/BSU17030___cotE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02753___cotE-BSU17030___cotE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02753___cotE-BSU17030___cotE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02753___cotE
# 2: BSU17030___cotE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     546/546 (100.0%)
# Similarity:   546/546 (100.0%)
# Gaps:           0/546 ( 0.0%)
# Score: 2730.0
# 
#
#=======================================

BSNT_02753___      1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co      1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG     50

BSNT_02753___     51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGAAAAAACCGAGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co     51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGAAAAAACCGAGCA    100

BSNT_02753___    101 GCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    101 GCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAATT    150

BSNT_02753___    151 GGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    151 GGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACTC    200

BSNT_02753___    201 TTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    201 TTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATATG    250

BSNT_02753___    251 TAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    251 TAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGAG    300

BSNT_02753___    301 CATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    301 CATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGAC    350

BSNT_02753___    351 CATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    351 CATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTTT    400

BSNT_02753___    401 TGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    401 TGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGAC    450

BSNT_02753___    451 TGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    451 TGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCT    500

BSNT_02753___    501 TGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAA    546
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU17030___co    501 TGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAA    546


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.