Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02743 and BSU16960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:04
# Commandline: needle
# -asequence dna-align/BSNT_02743___ymdA.1.22522.seq
# -bsequence dna-align/BSU16960___ymdA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02743___ymdA-BSU16960___ymdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02743___ymdA-BSU16960___ymdA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02743___ymdA
# 2: BSU16960___ymdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1563
# Identity: 1559/1563 (99.7%)
# Similarity: 1559/1563 (99.7%)
# Gaps: 0/1563 ( 0.0%)
# Score: 7779.0
#
#
#=======================================
BSNT_02743___ 1 ATGACCCCAATTATGATGGTTCTCATCTCCATTTTGCTGATTCTACTCGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1 ATGACCCCAATTATGATGGTTCTCATCTCCATTTTGCTGATTCTACTCGG 50
BSNT_02743___ 51 TTTAGTTGTTGGCTACTTTGTTCGTAAAACCATTGCCGAAGCGAAAATTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 51 TTTAGTTGTTGGCTACTTTGTTCGTAAAACCATTGCCGAAGCGAAAATTG 100
BSNT_02743___ 101 CGGGCGCACGCGGTGCAGCCGAGCAAATTCTTGAAGATGCGAAGCGTGAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 101 CGGGCGCACGCGGTGCAGCCGAGCAAATTCTTGAAGATGCGAAGCGTGAT 150
BSNT_02743___ 151 GCTGAAGCACTGAAAAAAGAAGCTCTGCTTGAAGCAAAGGATGAAATCCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 151 GCTGAAGCACTGAAAAAAGAAGCTCTGCTTGAAGCAAAGGATGAAATCCA 200
BSNT_02743___ 201 CAAACTTCGAATAGATGCTGAACAGGAAGTTCGTGAAAGACGAAATGAGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 201 CAAACTTCGAATAGATGCTGAACAGGAAGTTCGTGAAAGACGAAATGAGC 250
BSNT_02743___ 251 TTCAAAAACAAGAAAACCGTTTACTCCAAAAGGAGGAAAACCTTGATCGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 251 TTCAAAAACAAGAAAACCGTTTACTCCAAAAGGAGGAAAACCTTGATCGC 300
BSNT_02743___ 301 AAACATGAGGGAATTGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 301 AAACATGAGGGAATTGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA 350
BSNT_02743___ 351 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 351 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG 400
BSNT_02743___ 401 ATGAGATGATTCGTATGCAGCAGTCTGAGTTGGAACGAATTTCGAGTCTA 450
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU16960___ym 401 ATGAGATGATTCGTATGCAGCAGTCTGAGTTGGAACGAATTTCGAGTCTG 450
BSNT_02743___ 451 ACTCGTGACGAAGCGAAACAAATCATTCTTGAGCGGGTTGAAAACGAGCT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 451 ACTCGTGACGAAGCGAAACAAATCATTCTTGAGCGGGTTGAAAACGAGCT 500
BSNT_02743___ 501 TTCACATGACATCGCCATCATGACAAAAGAAACTGAAAACCGTGCGAAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 501 TTCACATGACATCGCCATCATGACAAAAGAAACTGAAAACCGTGCGAAAG 550
BSNT_02743___ 551 AAGAGGCGGATAAGAAAGCGAAAAACATTCTTTCACTCGCCTTACAGCGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 551 AAGAGGCGGATAAGAAAGCGAAAAACATTCTTTCACTCGCCTTACAGCGC 600
BSNT_02743___ 601 TGCGCAGCGGACCACGTTGCCGAAACAACGGTATCAGTTGTCAATCTTCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 601 TGCGCAGCGGACCACGTTGCCGAAACAACGGTATCAGTTGTCAATCTTCC 650
BSNT_02743___ 651 AAATGATGAGATGAAAGGACGTATCATCGGACGGGAAGGGCGTAACATTC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 651 AAATGATGAGATGAAAGGACGTATCATCGGACGGGAAGGGCGTAACATTC 700
BSNT_02743___ 701 GTACGCTTGAAACGCTGACAGGAATTGACCTGATTATTGATGATACGCCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 701 GTACGCTTGAAACGCTGACAGGAATTGACCTGATTATTGATGATACGCCT 750
BSNT_02743___ 751 GAAGCTGTCATTCTTTCCGGATTTGATCCGATCAGACGTGAGACAGCCAG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 751 GAAGCTGTCATTCTTTCCGGATTTGATCCGATCAGACGTGAGACAGCCAG 800
BSNT_02743___ 801 AATTGCTCTTGATAAACTCGTTCAGGATGGCCGTATTCATCCGGCACGGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 801 AATTGCTCTTGATAAACTCGTTCAGGATGGCCGTATTCATCCGGCACGGA 850
BSNT_02743___ 851 TTGAAGAAATGGTTGAAAAATCTCGCCGCGAGGTCGATGACTATATTCGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 851 TTGAAGAAATGGTTGAAAAATCTCGCCGCGAGGTCGATGACTATATTCGT 900
BSNT_02743___ 901 GAGATGGGTGAGCAAACGACATTTGAGGTTGGCGTTCATGGCCTCCACCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 901 GAGATGGGTGAGCAAACGACATTTGAGGTTGGCGTTCATGGCCTCCACCC 950
BSNT_02743___ 951 AGATCTCATCAAGATCCTCGGCCGCTTAAAGTTCCGTACAAGCTACGGTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 951 AGATCTCATCAAGATCCTCGGCCGCTTAAAGTTCCGTACAAGCTACGGTC 1000
BSNT_02743___ 1001 AAAATGTGCTTAAGCATTCCATGGAAGTCGCATTCTTGGCCGGTCTAATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1001 AAAATGTGCTTAAGCATTCCATGGAAGTCGCATTCTTGGCCGGTCTAATG 1050
BSNT_02743___ 1051 GCATCGGAGCTTGGTGAAGACGCAAAGCTTGCTAAACGTGCGGGTCTTCT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1051 GCATCGGAGCTTGGTGAAGACGCAAAGCTTGCTAAACGTGCGGGTCTTCT 1100
BSNT_02743___ 1101 TCACGACATCGGGAAAGCAATTGACCATGAAGTAGAAGGAAGCCACGTTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1101 TCACGACATCGGGAAAGCAATTGACCATGAAGTAGAAGGAAGCCACGTTG 1150
BSNT_02743___ 1151 AGATCGGGGTAGAGCTTGCGACCAAATATAAAGAGCACCCAGTCGTGATT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1151 AGATCGGGGTAGAGCTTGCGACCAAATATAAAGAGCACCCAGTCGTGATT 1200
BSNT_02743___ 1201 AACAGTATTGCATCACACCACGGGGACGAGGAGCCGACTTCCATTATTGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1201 AACAGTATTGCATCACACCACGGGGACGAGGAGCCGACTTCCATTATTGC 1250
BSNT_02743___ 1251 TGTGCTGGTAGCTGCAGCAGATGCGCTTTCCGCTGCAAGACCTGGCGCAA 1300
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1251 TGTACTGGTAGCTGCAGCAGATGCGCTTTCCGCTGCAAGACCTGGCGCAA 1300
BSNT_02743___ 1301 GAAGTGAGACGCTCGAGAATTATATTCGAAGACTTGAAAAACTCGAAGAA 1350
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16960___ym 1301 GAAGTGAGACGCTCGAGAATTATATTCGAAGACTTGAAAAACTTGAAGAA 1350
BSNT_02743___ 1351 ATTTCTGAGTCCTACGAAGGTGTTGAAAAATCATTTGCCATTCAGGCTGG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1351 ATTTCTGAGTCCTACGAAGGTGTTGAAAAATCATTTGCCATTCAGGCTGG 1400
BSNT_02743___ 1401 ACGCGAAGTGCGTATTATGGTGAAGCCGGATTCAATTAATGATCTTGAGG 1450
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU16960___ym 1401 ACGCGAAGTGCGAATTATGGTGAAGCCGGATTCAATTAATGATCTTGAGG 1450
BSNT_02743___ 1451 CTCATCGACTGGCGCGAGATATCCGCAAGCGAATTGAGGACGAGCTCGAT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1451 CTCATCGACTGGCGCGAGATATCCGCAAGCGAATTGAGGACGAGCTCGAT 1500
BSNT_02743___ 1501 TATCCAGGTCATATTAAGGTGACAGTAATCAGAGAGACTCGAGCCGTAGA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym 1501 TATCCAGGTCATATTAAGGTGACAGTAATCAGAGAGACTCGAGCCGTAGA 1550
BSNT_02743___ 1551 GTATGCAAAATAA 1563
|||||||||||||
BSU16960___ym 1551 GTATGCAAAATAA 1563
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