Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02742 and BSU16950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:04
# Commandline: needle
# -asequence dna-align/BSNT_02742___pbpX.1.22522.seq
# -bsequence dna-align/BSU16950___pbpX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02742___pbpX-BSU16950___pbpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02742___pbpX-BSU16950___pbpX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: BSU16950___pbpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1176
# Identity: 1155/1176 (98.2%)
# Similarity: 1155/1176 (98.2%)
# Gaps: 0/1176 ( 0.0%)
# Score: 5691.0
#
#
#=======================================
BSNT_02742___ 1 ATGACAAGCCCAACCCGCAGAAGAACTGCGAAACACAGACGGAGAAAACT 50
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU16950___pb 1 ATGACAAGCCCAACCCGCAGAAGAACTGCGAAACGCAGACGGAGAAAACT 50
BSNT_02742___ 51 AAATAAAAGAGGAAAACTGTTGCTTGGTCTTTTAGCAGTGATGGTTTGCA 100
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU16950___pb 51 AAATAAAAGAGGAAAACTGTTGTTTGGTCTTTTAGCAGTGATGGTTTGCA 100
BSNT_02742___ 101 TTACGATTTGGAATGCTCTTCATCGGAATAGTGAAGAAAACGAACCATCT 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU16950___pb 101 TTACGATTTGGAATGCTCTTCATCGAAATAGTGAAGAAAACGAACCATCT 150
BSNT_02742___ 151 CAAGAAACTGCAGCGGTTTCAAATACCGATCAGAAAAAAGAGGTCAAAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 151 CAAGAAACTGCAGCGGTTTCAAATACCGATCAGAAAAAAGAGGTCAAAAA 200
BSNT_02742___ 201 GAAAACTGCCAAAAAATCAGAGGAACAAATCAAAACAGTGGATCGAAATC 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU16950___pb 201 GAAAACTGCCAAAAAATCAGAGGAACAAATCAAAACAGTGGATCGAAACC 250
BSNT_02742___ 251 AAAAAATCAGCAATTATTTAGAAGAAATCGGTTTCAGCGGAACAGCCATG 300
||||||||||||||||||||.||||.||||||||||||||||||||||||
BSU16950___pb 251 AAAAAATCAGCAATTATTTAAAAGAGATCGGTTTCAGCGGAACAGCCATG 300
BSNT_02742___ 301 ATTGTCAGAAATGGAGAAATCGTAACAAATAAAGGTTTTGGCTATGCTGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 301 ATTGTCAGAAATGGAGAAATCGTAACAAATAAAGGTTTTGGCTATGCTGA 350
BSNT_02742___ 351 CCGTAAACACTACATTCAAAATAATCCATTGACATCTTTTTATGTCGGTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 351 CCGTAAACACTACATTCAAAATAATCCATTGACATCTTTTTATGTCGGTT 400
BSNT_02742___ 401 CATCACAAAAAGCGCTGATTGCAACTGCTATTTTGCAGCTAGAGGAAAAG 450
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU16950___pb 401 CATCACAAAAAGCGCTGATTGCAACTGCTATTTTGCAGCTTGAGGAAAAG 450
BSNT_02742___ 451 GGGAAACTTCAGACAAGTGATCCGGTAAGTACGTATTTACCTCATTTTCC 500
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU16950___pb 451 GGGAAACTTCAGACAAGTGATCCGGTAAGCACGTATTTACCTCATTTTCC 500
BSNT_02742___ 501 TAACGGACAAACGATTACTTTGAAGAATCTGCTTACACATACATCGGGGA 550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 501 CAACGGACAAACGATTACTTTGAAGAATCTGCTTACACATACATCGGGGA 550
BSNT_02742___ 551 TAAACGGACATATTGAAGGAGACGGCGCCATTACGCCGGACGATTTAATA 600
||||||||||||||||||||.|||||||||||||.|||||||||||||||
BSU16950___pb 551 TAAACGGACATATTGAAGGAAACGGCGCCATTACTCCGGACGATTTAATA 600
BSNT_02742___ 601 AAAGACATAGAACTGCAGGGAATCAAACGTCAGCCGGGCGTATGGGACTA 650
|||||.||||||||.|||||||||||||||||||||||||||||||||||
BSU16950___pb 601 AAAGATATAGAACTTCAGGGAATCAAACGTCAGCCGGGCGTATGGGACTA 650
BSNT_02742___ 651 CCAGGATTCCAACTATTCTGTTCTCGCTTATATTATTGCTGAAGTAAGCG 700
|.||||||||||||||||||||||.|||||||||||||||||||||||||
BSU16950___pb 651 CAAGGATTCCAACTATTCTGTTCTTGCTTATATTATTGCTGAAGTAAGCG 700
BSNT_02742___ 701 GTGAGCCCTATGAACAGTACATAAAGAATCATATTTTTAAGCCTGCGGGA 750
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU16950___pb 701 GTGAGCCCTATGAACAGTACATAAAGAATCATATTTTTAAACCTGCGGGA 750
BSNT_02742___ 751 ATGACGCATGCAGGCTTTTACAAAACATATGAAAAAGAACCTTATCCTGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 751 ATGACGCATGCAGGCTTTTACAAAACATATGAAAAAGAACCTTATCCTGC 800
BSNT_02742___ 801 TGTCGGGTATAAGATGAAGGGCGGCAAAACAGTTACACCGTATATACCTG 850
.|||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU16950___pb 801 CGTCGGGTATAAGATGGAGGGCAGCAAAACAGTTACACCGTATATACCTG 850
BSNT_02742___ 851 ATCTATCCCAGCTGTATGGAGCGGGTGATATTTATATGAGCGCTATAGAT 900
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 851 ATTTATCCCAGCTGTATGGAGCGGGTGATATTTATATGAGCGCTATAGAT 900
BSNT_02742___ 901 ATGTACAAATTTGACCAAGCGCTGATAGACGGAAAACTGTATTCGCAAAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 901 ATGTACAAATTTGACCAAGCGCTGATAGACGGAAAACTGTATTCGCAAAA 950
BSNT_02742___ 951 AAGCTATGAAAAGATGTTTACGCCAGGGAGCAGCTCCACATACGGCATGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 951 AAGCTATGAAAAGATGTTTACGCCAGGGAGCAGCTCCACATACGGCATGG 1000
BSNT_02742___ 1001 GATTTTATGTTGATCCCGGAAGCTATTCAAACCATGGTGTTATGCCGGGC 1050
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU16950___pb 1001 GATTTTATGTTGCTCCCGGAAGCTATTCAAACCATGGTGTTATGCCGGGC 1050
BSNT_02742___ 1051 TTCAATATCTTGAACAGCTTTAGCAAATCTGGGCAAACCATTGTTATTTT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 1051 TTCAATATCTTGAACAGCTTTAGCAAATCTGGGCAAACCATTGTTATTTT 1100
BSNT_02742___ 1101 GTTCTCAAACATTCAAAATAATGCTAAATTGGGCCAAGTGAACAATAAAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16950___pb 1101 GTTCTCAAACATTCAAAATAATGCTAAATTGGGCCAAGTGAACAATAAAA 1150
BSNT_02742___ 1151 TATACCAGCTTCTAAATCAAGAATGA 1176
||||||||||||||||||||||||||
BSU16950___pb 1151 TATACCAGCTTCTAAATCAAGAATGA 1176
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