Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02733 and BSU16860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:03
# Commandline: needle
# -asequence dna-align/BSNT_02733___ymfH.1.22522.seq
# -bsequence dna-align/BSU16860___ymfH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02733___ymfH-BSU16860___ymfH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02733___ymfH-BSU16860___ymfH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02733___ymfH
# 2: BSU16860___ymfH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1287
# Identity: 1279/1287 (99.4%)
# Similarity: 1279/1287 (99.4%)
# Gaps: 0/1287 ( 0.0%)
# Score: 6363.0
#
#
#=======================================
BSNT_02733___ 1 TTGATCAAACCAATCGAATATGAACAGCTTCAGGAGACGCTGTATCATGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 1 TTGATCAAACCAATCGAATATGAACAGCTTCAGGAGACGCTGTATCATGA 50
BSNT_02733___ 51 AAAAATGTCCAACGGCCTTGATGTTTACGTTTTGCCGAAAAAAGGCTTCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 51 AAAAATGTCCAACGGCCTTGATGTTTACGTTTTGCCGAAAAAAGGCTTCA 100
BSNT_02733___ 101 ACAAGACATATGCGGTCTTTACAACAAAGTACGGCTCGATAGATAACCGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 101 ACAAGACATATGCGGTCTTTACAACAAAGTACGGCTCGATAGATAACCGG 150
BSNT_02733___ 151 TTTGTCCCTTTAGGTAAAAACGAGATGGTTCACGTGCCGGACGGGATTGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 151 TTTGTCCCTTTAGGTAAAAACGAGATGGTTCACGTGCCGGACGGGATTGC 200
BSNT_02733___ 201 TCACTTTCTTGAGCACAAGCTGTTTGAGAAAGCGGACGGAGACGTTTTTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 201 TCACTTTCTTGAGCACAAGCTGTTTGAGAAAGCGGACGGAGACGTTTTTC 250
BSNT_02733___ 251 AAGATTTCAGCAAACAGGGGGCTTCTGCCAATGCGTTTACGTCATTTACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 251 AAGATTTCAGCAAACAGGGGGCTTCTGCCAATGCGTTTACGTCATTTACA 300
BSNT_02733___ 301 AGAACGGCTTACCTTTTCTCAAGCACATCAAATGTTGAACGCAATTTAGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 301 AGAACGGCTTACCTTTTCTCAAGCACATCAAATGTTGAACGCAATTTAGA 350
BSNT_02733___ 351 GACGCTTATCGATTTCGTACAGGACCCATATTTTACTGAAAAAACGGTTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 351 GACGCTTATCGATTTCGTACAGGACCCATATTTTACTGAAAAAACGGTTG 400
BSNT_02733___ 401 AAAAGGAAAAAGGGATTATCGGGCAGGAGATTAATATGTACGACGATAAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 401 AAAAGGAAAAAGGGATTATCGGGCAGGAGATTAATATGTACGACGATAAC 450
BSNT_02733___ 451 CCTGATTGGAGGCTTTACTTCGGGGTCATTGAAAACATGTACAAAGAGCA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 451 CCTGATTGGAGGCTTTACTTCGGGGTCATTGAAAACATGTACAAAGAGCA 500
BSNT_02733___ 501 TCCTGTCAGAATTGACATAGCGGGAACAGTGGAAAGCATTTCACATATTA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 501 TCCTGTCAGAATTGACATAGCGGGAACAGTGGAAAGCATTTCACATATTA 550
BSNT_02733___ 551 CAAAAGACCTTCTTTATGAATGCTATGAAACGTTTTATCACCCGAGTAAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 551 CAAAAGACCTTCTTTATGAATGCTATGAAACGTTTTATCACCCGAGTAAC 600
BSNT_02733___ 601 ATGCTCCTTTTCATTGTCGGACCTGTAGATCCTGAAGCGATTATTTCTCA 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU16860___ym 601 ATGCTCCTTTTCATTGTCGGCCCTGTAGATCCTGAAGCGATTATTTCTCA 650
BSNT_02733___ 651 GGTAAGAGAAAACCAGGGGAAAAAGCCGTATACTGATCAGCCGGAGATCA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 651 GGTAAGAGAAAACCAGGGGAAAAAGCCGTATACTGATCAGCCGGAGATCA 700
BSNT_02733___ 701 AACGGGAAGAAGTGAAAGAGCAAGAAGCGGTTTTCCGAAAAGAAAAAGAG 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 701 AACGAGAAGAAGTGAAAGAGCAAGAAGCGGTTTTCCGAAAAGAAAAAGAG 750
BSNT_02733___ 751 ATCAAAATGAACGTGCAGGGACCGAAATGCCTTGTTGGGCTGAAATCCAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 751 ATCAAAATGAACGTGCAGGGACCGAAATGCCTTGTTGGGCTGAAATCCAA 800
BSNT_02733___ 801 AAATCCGTTTAAATTAGGCAAAGAGCTCTTAAAGCATGAACTTTCAATGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 801 AAATCCGTTTAAATTAGGCAAAGAGCTCTTAAAGCATGAACTTTCAATGA 850
BSNT_02733___ 851 ACTTATTGCTTGAAGCTCTTTTTGGCAAAAGCTCTGCCCAGTATGAATCA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 851 ACTTATTGCTTGAAGCTCTTTTTGGCAAAAGCTCTGCCCAGTATGAATCA 900
BSNT_02733___ 901 CTTTATGAAAAAGGATATATTGACGAAACGTTTAGCTTTGATTTTACTGC 950
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU16860___ym 901 CTTTATGAAAAAGGATATATTGACGAAACGTTCAGCTTTGATTTTACTGC 950
BSNT_02733___ 951 TGAATATGGGTTCGGTTTTGCGGCGATCGGCGGAGATACGCCTGAGCCTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 951 TGAATATGGGTTCGGTTTTGCGGCGATCGGCGGAGATACGCCTGAGCCTG 1000
BSNT_02733___ 1001 ATCAATTGGCTGAAGACATTTCAAGCATGCTTTTGCGCGCCGGTGAACTG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16860___ym 1001 ATCAATTGGCTGAAGACATTTCAAGCATGCTTTTGCGCGCCGGTGAACTG 1050
BSNT_02733___ 1051 ATTACTGCTGAAAAGATTGAACTTGCCAGAAAGAAAAAGATTGGCACATT 1100
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU16860___ym 1051 ATTACTGCTGAAAAGATTGAACTTGCCAGAAAGAAAAAGATCGGCACATT 1100
BSNT_02733___ 1101 CTTAAAAGCGCTGAATTCCCCTGAATACATTGCCAATCAATTTACCCGTT 1150
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU16860___ym 1101 CTTAAAAGCGCTGAATTCCCCTGAATACATCGCCAATCAATTTACCCGTT 1150
BSNT_02733___ 1151 ATGCGTTCTTGGATATGAGTCTGTTTGACGTTGTAACGGTACTCGAGCAG 1200
|||||||||||||||||||.||||||||.|||||||||||||||||||||
BSU16860___ym 1151 ATGCGTTCTTGGATATGAGCCTGTTTGATGTTGTAACGGTACTCGAGCAG 1200
BSNT_02733___ 1201 ATTACCCTCGAGGATGTCCAGAACGTAATACAAGAGGAAATTGCTGCAGA 1250
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU16860___ym 1201 ATTACCCTCGAGGATGTCCAGAACGTAATACAAGAGGAAATCGCTGCAGA 1250
BSNT_02733___ 1251 CAGACTGACTGTCTGCAAGGTTGTTCCTAAATCATAA 1287
|||||||||||||||||||||||||||||||||||||
BSU16860___ym 1251 CAGACTGACTGTCTGCAAGGTTGTTCCTAAATCATAA 1287
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